ggKbase home page

scnpilot_p_inoc_scaffold_39223_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1056..1661

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_13_Bacteroidetes_46_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 171.0
  • Bit_score: 109
  • Evalue 4.20e-21
Formate hydrogenlyase transcriptional activator id=4486024 bin=GWF2_Bacteroidetes_41_61 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 187.0
  • Bit_score: 108
  • Evalue 8.70e-21
putative multi-sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 181.0
  • Bit_score: 99
  • Evalue 8.80e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bacteroidetes_46_8_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAGATGATAAAGAAGAATTGAAACGTTTAAATGACAGTCTTAACGAACGTCTTCGCGAAGCAGAAGAAACTTTAGAGGCCATACGCAGCGGACAAGTCGATGCCGTTGTACTCAAGGATTCTCAAGGGAAAAGAGTCTATTCTCTCATTAGTCCTGACCATCCCTATCAAATATTTTTTGACAACATGGATGAAGCTGCGGTGATTCTTTCCAAAGAACAGATCATCCTCTATGCCAACCATAATTTTTTTGAACTAATCGGAAGTACTGCAGAAAATGTCCTAGGCTCTTCTATCTTAAATCTTCTCTACGAGAAAGATCGAACCTATTTCACCAGCGCTTTACTAAAGGAAAAAAAGAAAAAAGCTGAACTTGTCATCTTGAGTAAAAGCCAGGAACCTCGTATCGTATTAGTCTCAGTATTCAGCGGCATGTGGAATGAAGACGAGCAGGTCTGTCTTTTCTTAAGAGATATTACAGAACTCAAGAGAGCTCAAAATTATGTACGTGCCTCAGAGGCGATTTCCAAAATCTTAAGCGAAACCTCCCCTCTTCCTCTTGCTACTCAATTAGTGCTCCCTGTCATTCAAGAGAATCTAGGC
PROTEIN sequence
Length: 202
MEDDKEELKRLNDSLNERLREAEETLEAIRSGQVDAVVLKDSQGKRVYSLISPDHPYQIFFDNMDEAAVILSKEQIILYANHNFFELIGSTAENVLGSSILNLLYEKDRTYFTSALLKEKKKKAELVILSKSQEPRIVLVSVFSGMWNEDEQVCLFLRDITELKRAQNYVRASEAISKILSETSPLPLATQLVLPVIQENLG