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scnpilot_p_inoc_scaffold_40149_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1263..1631)

Top 3 Functional Annotations

Value Algorithm Source
trbI; TrbI-like protein; K03195 type IV secretion system protein VirB10 id=12550368 bin=BDI species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 122.0
  • Bit_score: 229
  • Evalue 2.10e-57
Conjugative transfer protein TrbI {ECO:0000313|EMBL:GAO21836.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 121.0
  • Bit_score: 228
  • Evalue 6.40e-57
trbI; conjugal transfer TrbI transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 120.0
  • Bit_score: 225
  • Evalue 1.10e-56

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
CCGGACACGTCTTCGCTGACGCTGGACAACCTCGTGGGCACCGACCCTGCGGGTTACGCGGGGCTGGAGGATGATGTGGATCGCCACTGGGGCCGCATCCTGGCAGGGGCGGCGCTGACCACGCTGCTGGGCGTGGGCGCTGAGCTGGCCGCGCCGGAGAACCGGCAGGACGGCAACCGGATCATCATCGCCGGGCGCGACAGCGCGCAGGACAGCATCAACCAAGTGGGCCAGGAACTGACCCGGCGCAACATGAACGTCCAGCCGACGCTGACGGCGCGGCCGGGCCTGCCGGTGCGGATCATCGCCAGTCGCGATCTGGTGCTCCGCCCGTACCAGCCTTTGTTCCTTCAGCGGGGAGGCATGTAA
PROTEIN sequence
Length: 123
PDTSSLTLDNLVGTDPAGYAGLEDDVDRHWGRILAGAALTTLLGVGAELAAPENRQDGNRIIIAGRDSAQDSINQVGQELTRRNMNVQPTLTARPGLPVRIIASRDLVLRPYQPLFLQRGGM*