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scnpilot_p_inoc_scaffold_40157_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(449..1351)

Top 3 Functional Annotations

Value Algorithm Source
RAB23, member RAS oncogene family n=1 Tax=Xenopus tropicalis RepID=Q4KML3_XENTR similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 148.0
  • Bit_score: 101
  • Evalue 1.60e-18
rab23, MGC107825, hspc137; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 148.0
  • Bit_score: 101
  • Evalue 5.00e-19
RAB23, member RAS oncogene family {ECO:0000313|EMBL:AAH98510.1}; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xe similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 148.0
  • Bit_score: 101
  • Evalue 2.20e-18

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Taxonomy

Xenopus (Silurana) tropicalis → Xenopus → Anura → Amphibia → Chordata → Metazoa

Sequences

DNA sequence
Length: 903
ATGTTCAACTCTGTGACGCGCAACTACTACCGCGGCGCCGTGGCGGTGATCTATGTCTTCTCCACGATTGACCGCGACTCGTTCCTGGCGATCCCGAAGTGGCACTCGCTCATCATGGCCGAGTGCGGCGCCTCGGCCATCGTCCCCGTGCTGGTGCAGAACATGATGGACAAGGTCGAGCAGTCGGCCACGCCGCCCGCAGAGGTCGAGGCGCTTGCGCGGCAGATGGGCGCCAAGCTCTACCGTACTGCGCTGACGTCGCCGTCGCCGCTGCCGGACATCTTCGAGTACGTCGCCACGGCTTACATCCACCGGTCCAGCAGCGCTACCAACAACAACCACTGCAACGCAGGCGCGAACAGCACCAAAAACAACAAGGCGCTCACCAACCAGAGCTTCAACCACAGCGGCGACAGCTTCGGCGGCCACAACAGCAGCGGCGACCACGGCCCCGGCGGATTGGCCGTCAAGGTCTCTGCGGTGCCCTCGATGTCCGCCATCCCCGGCGCGCTTGAGAACACCACCGTGGGGCTTCTGCCCTCCACGCCCGCGCGCGCGCGCCCCGCGCCCAGTCCGCGCGGCACCGGCACTGGCAACGGTGGCGGGAGAGCGGCGTTTACAAGCGCGAGCAAGGGCGACGGCGCCGGGTTCGATCGCAGCATCGACGTGCCTGGCTACTCCGAGGGCTTCGTCACCGGCGGCGCGGCGGGGCGCGGCGGGGCGCGGGTGCTAGAGCACGAGTTCGATCAGGAGGCTGCGGACGCGCACGGCGACAACGGCAACGCAGGTACGGGGGCGAACACGACTGCCAATGCCGACCAGCTGCAGCAGCAGCAGCCAGGTAAGGACAGCAAGGAAAGTGGGAAAGAGGGTAAGAAGAAGGGTAAGTGTGTCGTGATGTGA
PROTEIN sequence
Length: 301
MFNSVTRNYYRGAVAVIYVFSTIDRDSFLAIPKWHSLIMAECGASAIVPVLVQNMMDKVEQSATPPAEVEALARQMGAKLYRTALTSPSPLPDIFEYVATAYIHRSSSATNNNHCNAGANSTKNNKALTNQSFNHSGDSFGGHNSSGDHGPGGLAVKVSAVPSMSAIPGALENTTVGLLPSTPARARPAPSPRGTGTGNGGGRAAFTSASKGDGAGFDRSIDVPGYSEGFVTGGAAGRGGARVLEHEFDQEAADAHGDNGNAGTGANTTANADQLQQQQPGKDSKESGKEGKKKGKCVVM*