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scnpilot_p_inoc_scaffold_41301_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1236..1592)

Top 3 Functional Annotations

Value Algorithm Source
cyclase n=1 Tax=Rhizobium loti RepID=UPI00037B9D16 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 2.50e-60
Uncharacterized protein {ECO:0000313|EMBL:GAJ96556.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 118.0
  • Bit_score: 243
  • Evalue 1.90e-61
cyclase family protein similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 117.0
  • Bit_score: 167
  • Evalue 2.60e-39

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GTCAAGGTGGTCGGCCACGACACCCAGGCCAACGACCACCCGCTCGCCACCGCCATCGGCCCGCAGCGCAACGGCCCGCTGCTGCCGCATCTGGCCGACGAATACCGCGAATGGTCGGGCGGCCACGACTGGAAGGACGACTTCCCCGAGTGGGAGCCGGTCCACCAGAAGATCTTCAAGGCCGGCATCCTCGGCATCGAGAATGTCGGCGGCGACCTCGACGCCGTCACCGGCAAGCGCTGCACCTTCGCCTTCTTCCCGATCAACTGGGACCGCGGCGACGGCTGCATCATCCGGCTGGTGGCGATGATCGACCGCAACCAGACCTACCGCATCGAGAAGGGCGAGGCGTTCTGA
PROTEIN sequence
Length: 119
VKVVGHDTQANDHPLATAIGPQRNGPLLPHLADEYREWSGGHDWKDDFPEWEPVHQKIFKAGILGIENVGGDLDAVTGKRCTFAFFPINWDRGDGCIIRLVAMIDRNQTYRIEKGEAF*