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scnpilot_p_inoc_scaffold_49444_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..171)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDFF similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 59.0
  • Bit_score: 88
  • Evalue 2.00e-15
RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 58.0
  • Bit_score: 87
  • Evalue 1.70e-15
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 58.0
  • Bit_score: 87
  • Evalue 8.30e-15

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGTTGCGGCGGCTTCTGGCCGCGCGGCTGGGTAGCCGTGACGATGCCGAAGACGCACTCCAGGACCTATGGTTGAAGCTCGACCATGTTCAGGCGCCGATCGCGCAGCCCGCGGCCTTCCTGTACCGGATGGCCGCGAACCATGCGACCGATCGCCGCATAGCAGCCTCG
PROTEIN sequence
Length: 57
MLRRLLAARLGSRDDAEDALQDLWLKLDHVQAPIAQPAAFLYRMAANHATDRRIAAS