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scnpilot_p_inoc_scaffold_43501_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(86..1528)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheD n=1 Tax=Rhizobium mongolense RepID=UPI0003B5286C similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 478.0
  • Bit_score: 237
  • Evalue 3.00e-59
chemotaxis motility protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 438.0
  • Bit_score: 238
  • Evalue 4.90e-60
Chemotaxis motility protein {ECO:0000313|EMBL:AJD40095.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 438.0
  • Bit_score: 238
  • Evalue 2.40e-59

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
GGCAGCGCGCTGGAGCGCGCCCGCGACGGCAATGACCGGTCGCCCGCCGACGCCCGCCACGCCGACGACGCCCGCTCCCGCCCCACCGAGACCGACAAGCGCAAATCGGCGTCCGAGGACGATAGGGACGCGGCGATGCCCGGCCGCCGCCCGGCCATCGATATTCGCATGACCGGTCGCGCCAGCGCACAGACGGGCGCGGCCACCGCGACCGGCCAGCCGGAAACGTCGGAAAGCCTTGCCGCCGGTCAGGCGGGCATCGCCAGGCTGCCGAAGAACCTGAGGCCGGCAGGTCAGGGTGCGCCGCTGAGCGACGAGGCGGACAGCGTTTCCGACGAGGCCGTCCAGACCCGGCCACATGCGGCCGGCGACGAAAAGACCAGCCGTGTCCGCAAGGGCCAGAAGACTGCGGGCGCAGACCCGGCACATGGAAAAGCCGCCGCCGGCAAGTCTGCCGGCGCGCCGGGTTCCGCCGAGGCCGATGCCCTGACATTGCTACAAGCTGCCGATGGTGCCGAGGCCGCGCCGACGGACGACAAAGCCGCCGTTGTAGACAAGGCCCTGCAGTCGGCGGCGAAGTCCGATGTGCCGCTCGCCGCGCTTGCCGCCCACGTCATGCCGGACAAAGCCGAAGCGGGTACTGCCAAGCCGGACGACGGCATAGGATATGTCGGCTCCCGCAAGGGGGGCGCGACGCCGCAAGCCACCGAGGACGGGGAAGGCGAGGCAAAGACCGATGCGCCCGCGCCGGGCGGACGCACCTTTCGTTTCAGCCGCGCCGATGGCCGTGGCCAGCGGCTCGACATGGTGATTGGCGACGGCGGCAAGGAGACCGCGCGCGAGCCGCGCAACAGCCCCGTCGAGGCCGTCACCGTGGTCGATTCCCGGCGTTATCTCGCCCTGTCCCAGAACAGCAATACCATCGTCAGCGCGCTTGGCGGCGATGCCGAATGGACCAGCGCCATGCAACCCAGCAGTGCGCTTTCCAACGCCGCCACCATGGCCAGCACCGGCAAGGTGGTGAATACCCTGAAGATCCAGATCCATCCGATGACGCTTGGCACAGTGACCGCCACCATGCGGCTGGCCGGCGACGAACTGAGCGTCGATCTGGCGGTCGAGACGGTGGCGGCCTATCGCCAGCTCACCGACGACCAGCGCGGTCTCGTGGATTCGCTGCGCGCCCAGGGTTTTGCCGTCGATCAGGTGACGGTGACGCTGGTTTCGCCCTCCGACAAGACCGATTCCTCCGGCACGCAGACCAACGGCCAGAATGCCGCCTTCGGCCAGCAGGCCGCTCAGGACGGCGGCGCCTCACCCCGCAGGGATGACAGACATGCAGCGCAACAGAACTGGCGTGGCGGCGACGCTATGGGCGATGACACGCAGACGCGTGCTGTCGCCGGCCCTGGCGGCGCTGGCACTGGCGCTCTCTACATCTGA
PROTEIN sequence
Length: 481
GSALERARDGNDRSPADARHADDARSRPTETDKRKSASEDDRDAAMPGRRPAIDIRMTGRASAQTGAATATGQPETSESLAAGQAGIARLPKNLRPAGQGAPLSDEADSVSDEAVQTRPHAAGDEKTSRVRKGQKTAGADPAHGKAAAGKSAGAPGSAEADALTLLQAADGAEAAPTDDKAAVVDKALQSAAKSDVPLAALAAHVMPDKAEAGTAKPDDGIGYVGSRKGGATPQATEDGEGEAKTDAPAPGGRTFRFSRADGRGQRLDMVIGDGGKETAREPRNSPVEAVTVVDSRRYLALSQNSNTIVSALGGDAEWTSAMQPSSALSNAATMASTGKVVNTLKIQIHPMTLGTVTATMRLAGDELSVDLAVETVAAYRQLTDDQRGLVDSLRAQGFAVDQVTVTLVSPSDKTDSSGTQTNGQNAAFGQQAAQDGGASPRRDDRHAAQQNWRGGDAMGDDTQTRAVAGPGGAGTGALYI*