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scnpilot_p_inoc_scaffold_44954_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(589..1488)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPV4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 301.0
  • Bit_score: 319
  • Evalue 4.80e-84
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 301.0
  • Bit_score: 319
  • Evalue 1.40e-84
TonB-dependent receptor {ECO:0000313|EMBL:KEQ28463.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antar similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 301.0
  • Bit_score: 319
  • Evalue 5.20e-84

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 900
TTTGTGAATGTAGCGCAATCACAGGCGAGCGGCAATACCAGCGTATTGAAAAATGCTAATGTTTATTACAGGAAAGGATGGGAATTTATTGTGAGCGGCTTTCCGGTGCGTGGAAAGGATTTCAGGTGGGAAACCACTTTCAATTTCAGCAATGTGCATACCTGGCTGAAAGACGCAACGGATAATCCCGACGGGTATATCGGGCAGATAAAAGAAGGGCAGCGTACGGACAGGATCTACATGACGGCATCCCGTGCGCCGGATGGTCAGGCTATTTATTACGATAATGGTATGCAGGCTTATGAGCCTTACGGACAATTTTTCGGATACAGTGATGCCGACTGGATTTACGGATGGCAGAATAATTTCACCTACAAAAATTTCTCTCTTAATCTGTCTGTAGACGGAAGGATCGGCGGACTGATCTATTCCACTACCAACCAGAAAATGTGGTGGGGTGGAACGGCGAGAGGGACTGTAAACCAGTTCCGGGATGACGCTAATGCAGGCAACAGCACCTATGTAGGCCCCGGTGTTGTGGTTACCTCAGGAAGCATTGAATATGACAGTCATGGCAATATTATTTCTGATACCAGGAAGTTTGCTCCTAATACGACTGCGGTCAATTATATAAGCTTTATGCAGACCACCAGCGGTCAAATGCTGAATAATTATTTTTATTACAGCGGCTCGTATTTGAAAATGCGTGAGCTCGTATTCACTTACCAGCTTCCTGCCAGATGGACTAAAGGAGTCTTTAACAATGCTTCCATTTCATTTATCGGGAACAACCTGTTCATCTTTGCTAAACTGCCTAACGTGGATCCGGATGCAGAGCGGGATGAACTGCAAACTCCTTCTATGAGAAGTGTGGGTGTTAACATCAATCTCAAATTTTAA
PROTEIN sequence
Length: 300
FVNVAQSQASGNTSVLKNANVYYRKGWEFIVSGFPVRGKDFRWETTFNFSNVHTWLKDATDNPDGYIGQIKEGQRTDRIYMTASRAPDGQAIYYDNGMQAYEPYGQFFGYSDADWIYGWQNNFTYKNFSLNLSVDGRIGGLIYSTTNQKMWWGGTARGTVNQFRDDANAGNSTYVGPGVVVTSGSIEYDSHGNIISDTRKFAPNTTAVNYISFMQTTSGQMLNNYFYYSGSYLKMRELVFTYQLPARWTKGVFNNASISFIGNNLFIFAKLPNVDPDAERDELQTPSMRSVGVNINLKF*