ggKbase home page

scnpilot_p_inoc_scaffold_50471_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(13..1938)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SB47_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 448.0
  • Bit_score: 671
  • Evalue 8.20e-190
  • rbh
Transposase {ECO:0000313|EMBL:EZP67317.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovo similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 448.0
  • Bit_score: 672
  • Evalue 5.20e-190
transposase similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 451.0
  • Bit_score: 505
  • Evalue 2.90e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGTTGAGCACCCTTCCTTCAGATGATCGGATCAGCACCGCCCATCACGCGAAGCTGGCCTATGTTTATGTTCGGCAATCAAGCGTCGGCCAAATCCGACACCATCAGGAAAGTACGGCGCTCCAATATAGGCTAGTTGATCGTGCGATGGGCCTGGGCTGGCCGCGTGATCGAATTGAGGTCATCGACGACGATCTGGGCAAGTCAGGTGCTGATGCCCATCAGCGCTTTGGCTTTCAACGCCTGATCGCAGAAGTCGGCCTTGGCCATGCCGGGTTGGTGCTCAGCTATGATGCGTCACGCCTTGCCCGCAATAACAGCGACTGGCACCAACTGCTCCAGCTATGTTCGATGTTCCGCGTCTTGATCGCGGACGCCGAGCGACTTTATGATCCTGGCCTTTATCATGATCGACTTCTGCTGGGGCTGTCGGGGATCATGAGCGAGGCTGAGCTTCACCAGATCCGCCAGCGGCTGCACCAAGGGGAGCGCCAAAAGGCGGCGCGGGGCGAATTGCGCATGCCACTTCCCGCTGGACTGACGCACGTGCCAGGCGGCGGCATCATGCTAAATCCTGATGTACGCGCCATTTTGAAAAACCCCGCTTATGCAGGAGCATATGTTTATGGTCGCAGATGCGCAGCACCGGAACGGCGTGGACCGGAATCACTGTCCCCGACCAAGGCAGTGCCGCGCGAGGAATGGGAGGTCTGTATAAAGGATGCGCATCCAGCATATGTCAGCTGGGAGGAATATATGAGCATCAGCGATCACCTTGCTGACAATGTCGGCAATTACCGTGCTGGACACCGCGGTGCGCCCCGTCGAGGGCGCGCGCTTCTTCAGGGCATTGTCATGTGCGGCATTTGCGGCCGCCATATGAGGCTTAACTACTCGGGGCCAAAAAGCGATTATCCGGTTTATCGCTGCCATTCGGAAGCCGGCATGTGCGCGGGCCAGTACTGTCAGGAGGTACGTGCGCCCGGAATTGAGGCAGCGGTCGAACGCCTGTTCCTCGCGGCGCTGTCACCCGACCAGCTAGCCATAACGCTGGCGGCGCTCGACGAGATCGACGACGATGCCCATGCGCTCGAACGTCAATGGGCGCTAAAGCGCGAACGCGCAGCCTATGAGGCAGAGCGTGCCCGGCGCCAATATAGCGTGGTAGAACCCGAGAACCGCCTGGTGGCGCGTTCGCTGGAAAGCATCTGGGAGGACAAACTTCGTGAGGCCGAGAGGGTCGAGCAGGATTATCAGCGATGGAAGGCTGAACAATCGGCAGTACTCAGCGCTGAGGACCGTGCCCGCATCGCAACCATGGGCATCAAACTGCCGGAACTGTGGAGCGCTATCGGCAATGCCGAACGCAAGGCAATCATACGGCTGGTCATCGACAAGGTGGTTGTTGACCAGCGCCGGGCCAAAGGCATGGTCTGGGTCCGTATCCTTTGGCAAACCGGTGCTTCAACCGAGCATTGGGTGATGCGCGGCACACAATCCTATAACGAGGCGGCACACGCAGAACAGCTCGAGGAGAAGATCCGCGAACTGAATGCCGCAGGCTGCATGGACGCCCAGATTGCGGCCGATCTCAACGCTCAAGGGTTGCCCAATTGCCGAGGCGGTCTGTTCGATCACGGCACCATCCATTTGCTGCGCAAGCGCTGGGGTATCCCCACGGTCAAAATCAACGGCGTCGGGAACAATCCGTCACGCTGGCCGGATGGGAGTTACTCGGTACAAGGCGCGGCCGATGCTATCGGTGTAACCGCGCAAACAGTGTTCAAATGGCTCAAAAAAGGGCATCTTCAGGGGCGACAGCTCGCCCCTGGTCAGCCTTGGCAAATCGACCTGACCGACGACCAGATCCAGGTGCTGCAAACGAAAATACGACGGACGAACCCTTCAAGGAGACAGGCATCATGA
PROTEIN sequence
Length: 642
MLSTLPSDDRISTAHHAKLAYVYVRQSSVGQIRHHQESTALQYRLVDRAMGLGWPRDRIEVIDDDLGKSGADAHQRFGFQRLIAEVGLGHAGLVLSYDASRLARNNSDWHQLLQLCSMFRVLIADAERLYDPGLYHDRLLLGLSGIMSEAELHQIRQRLHQGERQKAARGELRMPLPAGLTHVPGGGIMLNPDVRAILKNPAYAGAYVYGRRCAAPERRGPESLSPTKAVPREEWEVCIKDAHPAYVSWEEYMSISDHLADNVGNYRAGHRGAPRRGRALLQGIVMCGICGRHMRLNYSGPKSDYPVYRCHSEAGMCAGQYCQEVRAPGIEAAVERLFLAALSPDQLAITLAALDEIDDDAHALERQWALKRERAAYEAERARRQYSVVEPENRLVARSLESIWEDKLREAERVEQDYQRWKAEQSAVLSAEDRARIATMGIKLPELWSAIGNAERKAIIRLVIDKVVVDQRRAKGMVWVRILWQTGASTEHWVMRGTQSYNEAAHAEQLEEKIRELNAAGCMDAQIAADLNAQGLPNCRGGLFDHGTIHLLRKRWGIPTVKINGVGNNPSRWPDGSYSVQGAADAIGVTAQTVFKWLKKGHLQGRQLAPGQPWQIDLTDDQIQVLQTKIRRTNPSRRQAS*