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scnpilot_p_inoc_scaffold_46245_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..967)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcription regulator n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036A5C3A similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 317.0
  • Bit_score: 253
  • Evalue 3.50e-64
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 306.0
  • Bit_score: 252
  • Evalue 2.20e-64
LacI family transcriptional regulator {ECO:0000313|EMBL:AFU01025.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 70 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 306.0
  • Bit_score: 252
  • Evalue 1.10e-63

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Taxonomy

Nocardia brasiliensis → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGTCACGCGCGCGGACGTCGCCAGAAGGGCAGGGACGTCGACCGCCGTCGTCAGCTACGTCGTCAATGACGGGCCGCGGCCGGTGGCGGCGGAAACGCGCCAGCGCGTGCTCGATGCCATCGCCGAGCTCGGCTACAGGCCGAACCGCGTGGCGCAGGCGCTTCGCGGCCAGCGCTCGCGCGTTCTCGGCCTCATCGTCCCCGACATCTCGAACCCGTTTTATGCCGAGTTGGCGCGGGTCATCGAGAACTCGGCCGACCTCCTCGGCTACACGCTGGTGCTCGGCAACAGCGAGCAGGATGCGCAGCGCGAACTGCGCTATGTCCGCACCTTCCTCGACCGCCAGGTCGACGGCCTCTTCCTGATCAGTGGCTCCAGTTCGGAGGAGCTGATGACGCTCTCTTCCGAGGTCGCCATTCCCTTCGTCCTGCTCGACCGGCGCATCAATTACGCGCCCAACGCCTATCTGATCGCGACCGACGGCGTCGCCGGCGCCATGACGGCGACGCGGCACCTTCTCGATCTCGGCCACCGGCGCATCGCGGCGCTCTGCGGACCGGCGAAGATGCCGAGCGAGCGCGCCAAGGGCTATCTCCAGGCGATGGGCGAGGCGGGGCTCGAGCCGAAGCTCTATCATGCCGCCGACTTCGACCGTGCCTCGACCTATGAACTCGCCAAGCTGATCCTCGCCGACGAGGACCGCCCGACCGCGCTCTTCGCGACCTTCGATCTCGCCGGCATCAGCGTCATCCGCGCCGCCACCGATTGCGGCATGCAGATCCCGCGCGACATGGCCGTGATCGGCTATGACAATATCCAGGAAGGCCTCTATTCGACGCCGCGCCTCACCACGATGAGCCAGCCGACCGAGGAACTCGGCACGCTGGCGACGCGGCATCTCATCGGTCTCGTCGAGGGGCAGATCACGCGCACCTTCGGCATGCGCCTGCTCACGCCGCAACTC
PROTEIN sequence
Length: 322
MVTRADVARRAGTSTAVVSYVVNDGPRPVAAETRQRVLDAIAELGYRPNRVAQALRGQRSRVLGLIVPDISNPFYAELARVIENSADLLGYTLVLGNSEQDAQRELRYVRTFLDRQVDGLFLISGSSSEELMTLSSEVAIPFVLLDRRINYAPNAYLIATDGVAGAMTATRHLLDLGHRRIAALCGPAKMPSERAKGYLQAMGEAGLEPKLYHAADFDRASTYELAKLILADEDRPTALFATFDLAGISVIRAATDCGMQIPRDMAVIGYDNIQEGLYSTPRLTTMSQPTEELGTLATRHLIGLVEGQITRTFGMRLLTPQL