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scnpilot_p_inoc_scaffold_51224_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(366..1343)

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGU7_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 325.0
  • Bit_score: 652
  • Evalue 2.00e-184
  • rbh
type-IV secretion system protein TraC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 325.0
  • Bit_score: 652
  • Evalue 5.70e-185
Type-IV secretion system protein TraC {ECO:0000313|EMBL:AEB87067.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 325.0
  • Bit_score: 652
  • Evalue 2.80e-184

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATCAACCCGTTCACATGGGTGGGCACTGACGACGAGCTGGATTTCAAGGCCGAAATGCGGATGCTCAAGCCGATGATCGGCCGCATGGCGTCACCCAATGCGCCACTGACGGAATTCCAGTACGCGCTGATCGGGGAGGCGATTACCGCTGTCTGGCAGGACTACGGCCAGGACACCAACCCGACCCGCATCCGCGACTATCTGTTGAGCAACATCAAGAACGAGTCGGGCAGCACCGAGCGCGTGGCCTACGAGCTGGCCAAGCAGCTCGCGCCGTTCACCAAGGATGGCGTCTATGGCGACTTTTTCAATGGCCGCGCCAACATCAGCCTGGATGCTGACATGGTGGGTCTGGAGCTGGAAGAACTGAAGAACGCGCCCGAGCTGCGCCGCGTGGTGCTGTTCGTGCTGACCTCGCGCATTGCCCACGACATGTACCTGACCCGCGACCGCAAGAAGCTGTGTCTGGTCGATGAGGCGTGGCAGCTCCTGGGGGCCGACAAGGAAACCGCCGAGTTCATCGAGGAAGGCTACCGCCGCGCCCGGAAGTACAACGGAATTTTCTGCGTGGGTACGCAGGGCATCGAGGACGCTTACAAGAACGATGCGGCCCAGGCGGCCTACAACAACGCCGACTGGAAGATTCTGCTGCGCCAAGACCGCAAGAACCTGGAAAAGCTGATCGAGGACGGCATGGTGAATTTCTCGCCGGCCGTGAAGCGGATGCTGCTGTCGTTGCGTACCGAGCGCGGCCGCTTCAGCGAAATGCTCATTTCCTCGCCTAACGGCGATTCTGTGGTGCGTCACATCCCCGATCCGTTCTCCCTGCTGATGGCTTCGACCAACGCGCAGGACTTCAACGAATGCAACGCGCTGCTGGAGCAGGGCCATTCCACGATGGAAGCCCTGGAAATCATGCTGGCCCGCCGTACCCCTCAAGAACAACTGTCCCCGCGCCGGAGGAAAGATGACTACTGA
PROTEIN sequence
Length: 326
INPFTWVGTDDELDFKAEMRMLKPMIGRMASPNAPLTEFQYALIGEAITAVWQDYGQDTNPTRIRDYLLSNIKNESGSTERVAYELAKQLAPFTKDGVYGDFFNGRANISLDADMVGLELEELKNAPELRRVVLFVLTSRIAHDMYLTRDRKKLCLVDEAWQLLGADKETAEFIEEGYRRARKYNGIFCVGTQGIEDAYKNDAAQAAYNNADWKILLRQDRKNLEKLIEDGMVNFSPAVKRMLLSLRTERGRFSEMLISSPNGDSVVRHIPDPFSLLMASTNAQDFNECNALLEQGHSTMEALEIMLARRTPQEQLSPRRRKDDY*