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scnpilot_p_inoc_scaffold_52593_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..235)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator (LysR family) n=3 Tax=Xylella fastidiosa RepID=Q9PCM6_XYLFA similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 73.0
  • Bit_score: 143
  • Evalue 1.20e-31
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 73.0
  • Bit_score: 143
  • Evalue 3.50e-32
LysR family transcriptional regulator {ECO:0000313|EMBL:ETE31690.1}; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 73.0
  • Bit_score: 143
  • Evalue 1.70e-31

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Taxonomy

Xylella fastidiosa → Xylella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
TTGAGTCAGGACCGCGGGCAACTCGTCTTCAACACGACGCCGAACATGGTGGATGCTGCGCTTGCGGGGCTGGGTATTGCCGCCCTGCCCGGGGAGGTGTTCGCGCCGCACATCGAGGAAGGCCGCCTCATGCGCGTACTGCAGGACTGGTGCGAGCCTTTCTCCGGGTACTTCCTGTACCACCCCAGCCGCCGGCAACCATCGCCCGCGTTCTCGCTGGTGGTCGATGCGCTT
PROTEIN sequence
Length: 78
LSQDRGQLVFNTTPNMVDAALAGLGIAALPGEVFAPHIEEGRLMRVLQDWCEPFSGYFLYHPSRRQPSPAFSLVVDAL