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scnpilot_p_inoc_scaffold_60636_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..723

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZM9_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 240.0
  • Bit_score: 403
  • Evalue 1.20e-109
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 240.0
  • Bit_score: 403
  • Evalue 3.40e-110
  • rbh
Pseudouridine synthase {ECO:0000313|EMBL:ACU04725.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparin similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 240.0
  • Bit_score: 403
  • Evalue 1.70e-109

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 723
AAATATCCCAATTTTAAAGACCTTATACTTTTTGAAAACGACGATTATATTGTAGTTAACAAACCGCCTTTTGTGGCTTCGTTGGATGAGCGTGGCGCCGCAGGTGCTGGAGAAATTAACATTTTGCGCCTGGCTAGACAATACACTGAGGACGCTCAAATTTGTCACCGATTGGACAAGGAAACATCTGGGGCTATTGTAATTGCTAAAAATCCGGAGGCCTACAGGAATTTGTCTATCCAATTTGAGAAGAGAAAAGTTAGTAAGATTTATCATGCTATTGTTGATGGGCAGTTTCAGTTTGACAATTTGTTTGTTGACCTGCCAATTTTAAACGAAGGCAACAAAAATGTAACTATTGATAGGCAGGATGGTAAACGAGCTGAAACCTATTTTAATTCGATAGGCTACTTTAAACACTATACTTTGGTTGAGTGCAAGCCAATTACGGGTAGAATGCACCAAATTAGGATACATTTGGCCACGCAACGTGCTGCTATTTGTGGCGATACCATGTATAGAGGGAAGCCGGTATTTTTGTCGAAAATTAAACGTGGCTACCGTTTAACGGATGAAGAAGAGCAGCCTATTATGAAACGTTTTGCGCTACATGCCAAACAAATTACGTTTAAAGGGGTTGATGGAAATGAGATCTTAGTTGAAGCGCCCTATCCCAAAGATTTTGCAACGTTGCTTAAACTGCTTGAAAAGTTTGATAAGTAA
PROTEIN sequence
Length: 241
KYPNFKDLILFENDDYIVVNKPPFVASLDERGAAGAGEINILRLARQYTEDAQICHRLDKETSGAIVIAKNPEAYRNLSIQFEKRKVSKIYHAIVDGQFQFDNLFVDLPILNEGNKNVTIDRQDGKRAETYFNSIGYFKHYTLVECKPITGRMHQIRIHLATQRAAICGDTMYRGKPVFLSKIKRGYRLTDEEEQPIMKRFALHAKQITFKGVDGNEILVEAPYPKDFATLLKLLEKFDK*