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scnpilot_p_inoc_scaffold_57986_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 140..1216

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter barrel domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ72_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 341.0
  • Bit_score: 283
  • Evalue 3.50e-73
Outer membrane autotransporter barrel domain {ECO:0000313|EMBL:ABS65205.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibacu similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 341.0
  • Bit_score: 283
  • Evalue 5.00e-73
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 298.0
  • Bit_score: 277
  • Evalue 5.50e-72

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAACAAAATCTATCGGCTCGTCACGAGCCGCGTATCCGGTATTGTCCGGGTTGCCCCGGAAACTGCCCGTGCGCAAGGCAAGGGCAAGCGCCTCTTGATGGTCGCCCCGCTGGCCGCTGCGCTTGCCTGTGCGGGAGCATACGCAGCAGACTGGAACGCCCCCACGGGCGACTGGTTCACCCCCGGCAACTGGAGCACCAAAGCAGTCCCCTCAGCCGCTAATCAGGTCACCATCAATAATGGCGGCACTGCGCAGGTGCAATCCGCGGGCGCGGCCGCGGAGACAACCTATGTCGGGACGACCGGCAGCGGCACGCTCGCCATCAGCGGCGGCGGCGCGCTGAGCGGCACATACAGCTACATCGGCAGAAACGCCGGCGGCAGCGGCGTGGTGACGGTGGACGGTGCCGGCTCCAGCTGGAGCAACAGCAGCCATCTGTACGTGGGTGAGTACGGCAGCGGCACGCTTTCCATCAGCAACGGCGGCGCGCTGAGCAGCATGCAAAGCCTCATCGGTTACCGCGCCGGCAGCAGCGGCGTGGTGACCGTGGATGGCGCCGGCTCCAGCTGGAGCACGAGCGGTGGGTATCTGTACCTGGGCTTTTACGGCAGCGGCACGCTCGCCATCGGCCACGGCGGCGCGGTGAGCAGCCTGACCAGCTTCATCGGCTTCGAAGCCGGCGGCAGCGGCGCGGTGACGGTGGACGGCGCCGGCTCCAGCTGGAGCAACAGCGGCGATTTGCACGTGGGCATTCACGGCAGCGGCACGCTTTCCATCAGCCACGGCGGCGCGGTGAGCAATACCATTGGCCATATCGGCAGCTCCAGCGGCGGCAGCAGCACGGTGACGGTGGACGGCGCCGGCTCGCGCTGGAGCAACAGCGGCGATTTGTACGTGGGCGATTCCGGCAGTGGCACGCTTTCCATCAGCCACGGCGGCGCGGTGAGCGACAGAAGCGGTGTCATCGGCTACAGCGCCGGCAGCAGCGGCGCGGTGACGGTGGACGGCGCCGGCTCCAGCTGGAGCAACAGCGACGCTCTGCACGTGGGCTATTACGGCAGCGGCATGCTCGAT
PROTEIN sequence
Length: 359
MNKIYRLVTSRVSGIVRVAPETARAQGKGKRLLMVAPLAAALACAGAYAADWNAPTGDWFTPGNWSTKAVPSAANQVTINNGGTAQVQSAGAAAETTYVGTTGSGTLAISGGGALSGTYSYIGRNAGGSGVVTVDGAGSSWSNSSHLYVGEYGSGTLSISNGGALSSMQSLIGYRAGSSGVVTVDGAGSSWSTSGGYLYLGFYGSGTLAIGHGGAVSSLTSFIGFEAGGSGAVTVDGAGSSWSNSGDLHVGIHGSGTLSISHGGAVSNTIGHIGSSSGGSSTVTVDGAGSRWSNSGDLYVGDSGSGTLSISHGGAVSDRSGVIGYSAGSSGAVTVDGAGSSWSNSDALHVGYYGSGMLD