ggKbase home page

scnpilot_p_inoc_scaffold_61030_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..466

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037904C7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 133.0
  • Bit_score: 235
  • Evalue 3.60e-59
Uncharacterized protein {ECO:0000313|EMBL:CCU64008.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 129.0
  • Bit_score: 150
  • Evalue 1.60e-33
calcium-binding EF-hand similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 159.0
  • Bit_score: 105
  • Evalue 1.60e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
CCGGTGCATTGTGTTGTTGTGCTTTCATTTGAAGCCTTATTTAGAGAGAACATCATGTCCAGCAAAAAACCCCTGATTTCCGTCGCTGTTGGTTCCGCGTTTGCCGCCGCCCTGGGGGTAGCGCCGCTCGTTTCCGCAGCAGGGAATCCTTTCGCCATGCAGTCCCTGGACAAGGGCTACATGCTTGCTCAAGCCGGGAAAATGGGTGAAGGGAAGTGCGGTGCCGGCAAGTGCGGCGCCGCCATGATGAACGCCGGCAAGGGCGAAAAAAGCTGCAAGGCCGACGCCAACCAGGACGGCAAGGTCAGCAAGGAAGAGTTCACCAAGCACCATGAAGCCATGTTCGCCATGAAGGATGCCAACAAGGACGGCTTCATCGACAAGGATGAAATGGCCAGGATGATGGACGGCAAATGCGACGGCATGAAGGCAGGGGAAGGGAAATGCGGCGCCATGATGAAATAA
PROTEIN sequence
Length: 155
PVHCVVVLSFEALFRENIMSSKKPLISVAVGSAFAAALGVAPLVSAAGNPFAMQSLDKGYMLAQAGKMGEGKCGAGKCGAAMMNAGKGEKSCKADANQDGKVSKEEFTKHHEAMFAMKDANKDGFIDKDEMARMMDGKCDGMKAGEGKCGAMMK*