ggKbase home page

scnpilot_p_inoc_scaffold_58392_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 459..863

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y491_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 118.0
  • Bit_score: 96
  • Evalue 2.30e-17
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77470.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 118.0
  • Bit_score: 100
  • Evalue 1.70e-18
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 118.0
  • Bit_score: 96
  • Evalue 6.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCTGTAGCAAAGGCAAATACCATCGAAAGATTGGTAAAAGTATTGGTAATTGAGAGTGATATTGACTTAAGGCATATCCTTTCAGAACTTTTTGATTTAGAAGGTTATGAGTTCGTAATCCATTCTCATTCTTGTGATATTGTAAATCAAGTTACTAATTACCAACCAGATGTAGTGTTGCTAGATTACCGATTACCTACAGTGGACGGAAGCGATTTATGTGATAGCCTAAAGCATGATCCGCAAACTAGCCAGGTTCCTGTCATCATTTATTCTGTTGCTCCAGTTTCGGTTTTCTCACAGTTAAAAATTAAATACGACGCTTTCCTCGCAAAACCTTTCGACTTAAACGAGCTTTTAACCAATATCGAAAACTTGATAAGATGGCGAGCCACCACGTAG
PROTEIN sequence
Length: 135
MAVAKANTIERLVKVLVIESDIDLRHILSELFDLEGYEFVIHSHSCDIVNQVTNYQPDVVLLDYRLPTVDGSDLCDSLKHDPQTSQVPVIIYSVAPVSVFSQLKIKYDAFLAKPFDLNELLTNIENLIRWRATT*