ggKbase home page

scnpilot_p_inoc_scaffold_62190_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..473

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IXX8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 156.0
  • Bit_score: 266
  • Evalue 1.90e-68
Transposase {ECO:0000313|EMBL:KKC32542.1}; Flags: Fragment;; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophil similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 156.0
  • Bit_score: 284
  • Evalue 1.30e-73
putative integrase similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 156.0
  • Bit_score: 263
  • Evalue 3.50e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GCCGTCGTGGCCGAGGGCCAGGTCCTGTGTGAGCATGCACGCATTATCGAGCGGTCTCATCACCAGCCTGGCCGCACGGTCTATGACTGGCGGCACTATCTGGCGGTGATCCAGCGCAAGCCCGGCGCCCTGCGGAATGGCGCCCCCTTCGTCGATCTGCCCGAGGCGTTCCGTCGCCTGCAGGGCCATCTGCTCAAGCATCCAGGCGGCGACCGGGAAATGGTCGAGATCCTGGCGCTGGTGCTGCATCACGACGAGCAGGCGGTGCTCAAAGCCGTCGAGGTCGCGCTTGAGGCCGGCGTTCCCACCAAGACCCATGTGCTCAACCTCTTGCACCGCCTGGTTGATGGCAAGCCCAGCCAGGTTGAAGCGATCGATGCGCCGCAGGCCCTGGTCTTGCGCCAGGAGCCCAAAGCCAACGTTGCCCGCTATGACACGCTGCGCGGCAAGGATGTTCGCCATGCGTCATGA
PROTEIN sequence
Length: 157
AVVAEGQVLCEHARIIERSHHQPGRTVYDWRHYLAVIQRKPGALRNGAPFVDLPEAFRRLQGHLLKHPGGDREMVEILALVLHHDEQAVLKAVEVALEAGVPTKTHVLNLLHRLVDGKPSQVEAIDAPQALVLRQEPKANVARYDTLRGKDVRHAS*