ggKbase home page

scnpilot_p_inoc_scaffold_62342_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..393

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HXM3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 127.0
  • Bit_score: 149
  • Evalue 2.20e-33
Endonuclease {ECO:0000313|EMBL:EPR14986.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 127.0
  • Bit_score: 149
  • Evalue 3.10e-33
tdcF; endonuclease L-PSP (mRNA) endoribonuclease similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 127.0
  • Bit_score: 147
  • Evalue 2.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium chinhatense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GCCAATTCGCCCATCGTCGGCTCGATCGCGGTGCCCGCTGCGGCCAATCTGCTGTTTCTTTCTGGCGCGGTCGCCTCACCGATCGATCCGGCCAAGCCGGATGAGCTGGGCGATACCAAGGCGCAGACCCTGAGCATCCTCACCAAGATGAAGGCGTCGCTGGAAGCCAAGGGCTTTTCCATGGGCGACATCGTCAAGATGACGGTGTTCCTCGTCGGCACCCCGGAGACGGGCGGCCGCATGGACTCAGCCGGGATGAATGAGGTGTTCCGCACCTTCTTCGGCACGGCGGAACAACCCAACAAGCCCACCCGCTCGACAATCCAGGTCGCCGCGCTGGGCCGCCCGACCATGTATGTGGAGATCGAGGCCATCGCGGCGAAAATGCCGTGA
PROTEIN sequence
Length: 131
ANSPIVGSIAVPAAANLLFLSGAVASPIDPAKPDELGDTKAQTLSILTKMKASLEAKGFSMGDIVKMTVFLVGTPETGGRMDSAGMNEVFRTFFGTAEQPNKPTRSTIQVAALGRPTMYVEIEAIAAKMP*