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scnpilot_p_inoc_scaffold_62627_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(655..1146)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B57122 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 162.0
  • Bit_score: 274
  • Evalue 9.80e-71
Putative component of multidrug efflux pump, acrB/acrD/acrF family similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 158.0
  • Bit_score: 274
  • Evalue 2.70e-71
Transporter {ECO:0000313|EMBL:KJF73745.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 158.0
  • Bit_score: 274
  • Evalue 1.00e-70

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GCGGCCCAGTACGAGAGCATGACCCTGCCGATCGCGATCCTGCTGATCATCCCGATGGGGCTGCTGGCAGCGCTGACCGGCGTCTGGCTCTCGGGCGGAGACAACAACGTCTTCACCCAGATCGGCCTCGTCGTGCTTGTCGGACTATCCGCCAAGAACGCCATCCTGATCGTCGAATTCGCCAGGGAGCTCGAATTCGAGGGCAGGACGCCGGTCCAGGCCGCGATCGAGGCCAGCCGCCTGCGCCTGCGTCCGATCCTGATGACCTCGCTCGCCTTCGTCATGGGCGTGGTGCCGCTGGTGATCTCGACCGGGGCCGGTGCCGAGATGCGGCAGGCCATGGGCATCGCGGTCTTCGCCGGCATGATCGGCGTCACCGCCTTCGGCATCTTCCTGACGCCGGTCTTCTACGTGCTGATGCGCAAGCTGGCCGGCAACCGCCCGCTCGCCCGGCACGATATCGAGCAACCGGTCTTGCAGGCGGCCGAGTAA
PROTEIN sequence
Length: 164
AAQYESMTLPIAILLIIPMGLLAALTGVWLSGGDNNVFTQIGLVVLVGLSAKNAILIVEFARELEFEGRTPVQAAIEASRLRLRPILMTSLAFVMGVVPLVISTGAGAEMRQAMGIAVFAGMIGVTAFGIFLTPVFYVLMRKLAGNRPLARHDIEQPVLQAAE*