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scnpilot_p_inoc_scaffold_67131_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(754..1083)

Top 3 Functional Annotations

Value Algorithm Source
Octopine-binding periplasmic protein OccT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5L4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 217
  • Evalue 5.60e-54
ABC-type amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR81644.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 217
  • Evalue 7.80e-54
occT1; octopine-binding periplasmic protein OccT similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 116
  • Evalue 4.90e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
GCAGAACTGTTTCCGGGGATCGAGTTCCGCGAATACAAGTCGACGGAACAGCACGACCTCGACCTTGAGGCCGGCCGCATCGACGGCGTGATGGCGTCCCCCGTCGCGCTCGACCGGACGCTGGAGAAGATCGGTGCCGATCAGGTGGTCTTCGCCGGCACCGAGTTCACCGGCGGCCCGCTCGGGGGCGGCCAGTCGGTCGGCCTGCGCAAGGCGGATACCGAGCTGAAGGCGAAGTTCGACGAGGCGATCAACGCGGCGATCGCCGACGGAACGCTGTCGCGCCTCGCCGTCAAATGGTTCAAGCGCGATATCGCGCCGAAGAAGTAA
PROTEIN sequence
Length: 110
AELFPGIEFREYKSTEQHDLDLEAGRIDGVMASPVALDRTLEKIGADQVVFAGTEFTGGPLGGGQSVGLRKADTELKAKFDEAINAAIADGTLSRLAVKWFKRDIAPKK*