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scnpilot_p_inoc_scaffold_65275_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 487..1107

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14539 large subunit GTPase 1 [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 155
  • Evalue 2.00e-35
Lsg1, cytoplasmic GTPase involved in the ribosome assembly n=1 Tax=Ectocarpus siliculosus RepID=D7G7R6_ECTSI similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 178.0
  • Bit_score: 174
  • Evalue 1.00e-40
Lsg1, cytoplasmic GTPase involved in the ribosome assembly {ECO:0000313|EMBL:CBJ27797.1}; TaxID=2880 species="Eukaryota; Stramenopiles; PX clade; Phaeophyceae; Ectocarpales; Ectocarpaceae; Ectocarpus. similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 178.0
  • Bit_score: 174
  • Evalue 1.40e-40

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Taxonomy

Ectocarpus siliculosus → Ectocarpus → Ectocarpales → Phaeophyceae → Eukaryota

Sequences

DNA sequence
Length: 621
ATGCAATGCACGAATGAAGTCCTGAGTGAAATATTGTGTGTCTGCTCATATTTGTTGCTCGATTGTGCATATGTCTTTGTGTGTTTGGCACAATTCTTTGACAAGTACGTGTCCAGTGTTGCAGGTCCAAAGGGAAACGAACGATTACGATCCCAACTCGACACCACTTCATTAGAAGAGTTTGTGAATGCTGCGATCTTGAGTGAACGAGACTTCTCTGCTCGCAAAGAGCGGGAAGATGTTATTTTGATGAGTAGCGACGGCACGACTCAACTTGGCGGTGGACGCCGAAAGAAGCGAGGAAACAATCAACAATTCGACTTTCAGCAACTGAAAGTCCCTCGCCGTCCTCACTGGACACGTGAGATGACCCCTGAAGATCTCGATCGTCGCGAACGACAAGCGTTTTTGGATTGGCGTCGCGAATTGGCGCATATGGAAGAAGAGGACGATGATGGCAGGAAAGTAACTCCTTACGAGAAGAATATCGAAGTGTGGCGACAATTGTGGCGAGTGATGGAGCGCAGTGATATTGTCATGCAGATTGTCGATGCTCGAAACCCTCTGTTTTATTACTCGAGAGATCTCATGAAGTACGCCGCCGAGTTGGAACCAGCGAAA
PROTEIN sequence
Length: 207
MQCTNEVLSEILCVCSYLLLDCAYVFVCLAQFFDKYVSSVAGPKGNERLRSQLDTTSLEEFVNAAILSERDFSARKEREDVILMSSDGTTQLGGGRRKKRGNNQQFDFQQLKVPRRPHWTREMTPEDLDRRERQAFLDWRRELAHMEEEDDDGRKVTPYEKNIEVWRQLWRVMERSDIVMQIVDARNPLFYYSRDLMKYAAELEPAK