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scnpilot_p_inoc_scaffold_89001_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..308)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8S0_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 95.0
  • Bit_score: 82
  • Evalue 2.00e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 104.0
  • Bit_score: 84
  • Evalue 1.90e-14
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EWM16723.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 101.0
  • Bit_score: 84
  • Evalue 9.60e-14

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Taxonomy

Kutzneria sp. 744 → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAACAGGATTTCACCAGCAAGGATCAGCCGGCTCATCGGCAACTGGCGCGGGGCGGACGGCAAGGTCAGCCAGCAGTTGAGCCTGGCACTGGCCCGACTGATCGCGGCGCGGGAAGTGCCGATCGGCGGCCTGCTGCCGTCCGAACGAAGCCTCTCGACGGCGCTCGCGGTCAGCCGCGGCACCGTGGTCGCGGCCTATGCGTCGCTGCGCGATGCCGGCGTGCTCGACAGTCGCCACGGCAGCGGCCATCGCATCACCGCGCCCGCCGCCGCTTCTGGTGCCGCGCACACGCGCCTTGTCGGC
PROTEIN sequence
Length: 102
MNRISPARISRLIGNWRGADGKVSQQLSLALARLIAAREVPIGGLLPSERSLSTALAVSRGTVVAAYASLRDAGVLDSRHGSGHRITAPAAASGAAHTRLVG