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scnpilot_p_inoc_scaffold_74400_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(616..1002)

Top 3 Functional Annotations

Value Algorithm Source
livG2; branched-chain amino acid ABC transporter ATP-binding protein LivG (EC:3.6.3.22) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 107.0
  • Bit_score: 168
  • Evalue 1.70e-39
High-affinity branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 4.10e-48
High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:EYR78651.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 5.70e-48

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
CGCGAGAACATCATCGTCTCGCATCACCTGCGCTCGAAGGCGAGCCTCCTCGGCTTCTTCCTCGGCACCAGGCAGGCGCGCGAGGACGAGGCGGCCTTCGCCGCATCGGCCGACGACATCGTCGACTTCCTCGGCCTGCAGGCGATCCGCAACGCACTCGCCTCCAGCTTGCCGCAGGGCCACCTTCGCGCGCTCGGCATGGCCATCGGCCTTGCCACCGACCCCAAGGTCATCCTGCTCGACGAACCCTTCGCCGGCATGAACCACGACGAGACGATGAAGATGGTGGGCCTCGTGCGCCGGCTTCGCGACGAACGCGCGAGAGCCCGACAGGCCGCTCGACTCGCCCGTCGAGACGAGGCACGATCCGGCGGTTCGGCAAATTGA
PROTEIN sequence
Length: 129
RENIIVSHHLRSKASLLGFFLGTRQAREDEAAFAASADDIVDFLGLQAIRNALASSLPQGHLRALGMAIGLATDPKVILLDEPFAGMNHDETMKMVGLVRRLRDERARARQAARLARRDEARSGGSAN*