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scnpilot_p_inoc_scaffold_74583_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 248..1000

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 9.00e-98
ATP dependent DNA ligase, central n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYX6_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 3.20e-97
ATP dependent DNA ligase, central {ECO:0000313|EMBL:ABD06584.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodop similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 4.50e-97

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGGTTGCGGCAGTTTGGCGCCGCGCGTCCGTGAGAGTGCCCGCCGTGCCGTCCCGCAAGCTCGCCACCTATCGCCGCAAACGCGATTTCTCCCAGACCCGCGAACCGAGCGGCAAGGATGCCGTGGCCGCTGCGCCGCACCGCCGCTTCGTGATCCAGAAGCACGACGCGACCCGGCTGCACTACGACCTGCGCCTCGAACTCGGCGGCGTGTTCAAGTCGTGGGCGGTGACGCGCGGCCCATCGCTCGATCCCAAGGACAAGCGGCTCGCCGTCGAGGTCGAGGATCATCCGCTCGACTACGGCGATTTCGAAGGCACCATCCCGAAGGGCCAATATGGCGGCGGCACGGTGCAGATCTGGGATCGCGGCTACTGGCTGGCGGAAAATCCCGAGAAGGAATTGAAGAATGGCGACCTCAAATTCGTTCTCGACGGCGAAAAGCTGCACGGCGGCTTCGCGCTGGTGCGAATGCGCCATGATCGCAACGGCGGCAAGCGCACCAACTGGCTGCTGATCAAGCACCGCGACGAATATGCGCGCGAGGGAAAGGCCAACGACATTCTCGACGCGGACACATCGGTCGCCTCCGGGCGGTCGATCCCGCAGATCGCGCAAGGCAAGGGCCGTAGCCCGAAACCCTTCATGCTGGCGAAGGCATCCCGCAAGTCCGCCGCCAAGGCGATGGCGCGGCCGGATGCGGTGTGGGATTCGCGCAAGGGTCTGGCCGCCGAGGCGCGCGCGGCCGGCGCG
PROTEIN sequence
Length: 251
MVAAVWRRASVRVPAVPSRKLATYRRKRDFSQTREPSGKDAVAAAPHRRFVIQKHDATRLHYDLRLELGGVFKSWAVTRGPSLDPKDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVQIWDRGYWLAENPEKELKNGDLKFVLDGEKLHGGFALVRMRHDRNGGKRTNWLLIKHRDEYAREGKANDILDADTSVASGRSIPQIAQGKGRSPKPFMLAKASRKSAAKAMARPDAVWDSRKGLAAEARAAGA