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scnpilot_p_inoc_scaffold_82468_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(489..1073)

Top 3 Functional Annotations

Value Algorithm Source
Possible Transcriptional Regulator, TetR family id=1320208 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 131.0
  • Bit_score: 232
  • Evalue 3.90e-58
slmA, ttk; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 130.0
  • Bit_score: 232
  • Evalue 5.40e-58
slmA; nucleoid occlusion protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 128.0
  • Bit_score: 187
  • Evalue 4.00e-45

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGAGCAAGGCCGACAAAATCCGGCGACACAACAGCCTCAAGCCCATCAGCCACGGGGGTATTCGGGGCACGGTTCGCTTGGTGGGGACTGGTATACCCAGTGCTTACGCGGTTTGGCAGATGGCGGCAAAGGAAGCGCAGGCACCATTTAACCCGACATCAGCGATAATCATCCCTAATAAAAACAGGGGAGTGCCTGATGGACTGTTCGGGCTGATCGCGCGCATCACTGCCGACATCCCCTCGCCGGCCGCGCAGGTCAAGGCCATCCTCGGCATGCTGCTGAATTTTGCGGCGAAGAATCCCGGCATGACGCGGGTGTTGATCGGCGACGCACTGGTGCATGAAAACGAGCGCCTGCAAAAACGCATCAATCAACTGCATGACCGCATCGAAGCCCAGTTGCGCCAATGCCTGCGGCTGGCCGGCGACGAACTGGCCGAACGCAGCGCGCCGCTGGCCAATCTGCTGCAATGCGTGGTGGTGGGGCGCTGGCACCAGTTTGCCAAGAGCGGGTTTACCCGTGCGCCGGGCGGCGACATCGATCTGCTGCTGTCGCGCCTGCTCGACGCTCACCCTGCCTGA
PROTEIN sequence
Length: 195
VSKADKIRRHNSLKPISHGGIRGTVRLVGTGIPSAYAVWQMAAKEAQAPFNPTSAIIIPNKNRGVPDGLFGLIARITADIPSPAAQVKAILGMLLNFAAKNPGMTRVLIGDALVHENERLQKRINQLHDRIEAQLRQCLRLAGDELAERSAPLANLLQCVVVGRWHQFAKSGFTRAPGGDIDLLLSRLLDAHPA*