ggKbase home page

scnpilot_p_inoc_scaffold_66501_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(24..1094)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U152_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 348.0
  • Bit_score: 160
  • Evalue 3.40e-36
High-copy suppressor of rspA {ECO:0000313|EMBL:CDZ81275.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 356.0
  • Bit_score: 573
  • Evalue 1.80e-160
EmrB/QacA family drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 339.0
  • Bit_score: 156
  • Evalue 1.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1071
TTGCAAGGTTTTTCCGCTGGTATGGCACTTCCCCTTGGAATGGCAAAATTAATGAAAGTCATCCCTTTATCACACCGAGCAAAAATCACTGCTTCTATAAATACAGTTACACTCTTTGCTCCAGCTGTTGGGCCAATTCTTGGCGCTTACGTCACATCTTTAATGAATTGGCGTTGGATCTTTTTTTCTAAAATGCCATTATCCCTTTTATGTTTAGCTTTAAGCTATTTCTGGGTGAAAAAAGAGAACGTTTGCAGTAGATCCCCTTTTGACTGGTTAGGCTTTATTGTCGGTTCAACTGGTGTAATTGGTATAATGTGGGTATTTTCTCAGATTGGTAAAATAAATGGGTTATATTTATTTCTTTTTGCCATCTTTTGTTTTGGTTGTTTGGTTCAATTTATTAAAATAGAAAAAAGAATCTCACATCCTTTAGTGCCTCTTTCTTTATTTAGTATAAAAAAATTTAGTTATGGAAATATTATTCAATCAGCAGCCAATACAATTTTTTTGGGAGCTAATTTTTTAATTGCAATTTACTTGCAACAAGGACTTGGGATTGATCTTGTCACAACTGGGTGGATTATGGCTTCAATAACACCCGGAATGGTTATTGTACAGCCTTTAGTTGGAAAATACTACAATGTTTATGGTGCCTTACCTTTTATAGGAACTGGCCTTATCAGCTTATCTTTAGCAACTTATTGCTTTGTATTCACAACCCCCCAAACTTCTTACATACTATTAGGGGCATTAATTTTTTTAATTGGCGCTGCCTCTTCAATGACCCAAACGGCAAATGTAACCTCTATTTTTAGTAGCATACCTGATAAACATAAGGGATCTGGAAGTTCTTTATATTCATTATTTAAGCAATTATCCGCAAGCTTTGGAGTCGCTTTAACCACTTTGATCTTATCAATCACTTTGCCATCTAATGGAAGCTTAACAGCTGAAGTAAGCTCTTTCCATTATTGCTTTATCGTTTTAGGTTCTATTCCTTTATTCTCATTATATTTCTTTCGTTTTTTAAAACACGATACGGATTTAGTAATAGAAAGTAGCAGCTAA
PROTEIN sequence
Length: 357
LQGFSAGMALPLGMAKLMKVIPLSHRAKITASINTVTLFAPAVGPILGAYVTSLMNWRWIFFSKMPLSLLCLALSYFWVKKENVCSRSPFDWLGFIVGSTGVIGIMWVFSQIGKINGLYLFLFAIFCFGCLVQFIKIEKRISHPLVPLSLFSIKKFSYGNIIQSAANTIFLGANFLIAIYLQQGLGIDLVTTGWIMASITPGMVIVQPLVGKYYNVYGALPFIGTGLISLSLATYCFVFTTPQTSYILLGALIFLIGAASSMTQTANVTSIFSSIPDKHKGSGSSLYSLFKQLSASFGVALTTLILSITLPSNGSLTAEVSSFHYCFIVLGSIPLFSLYFFRFLKHDTDLVIESSS*