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scnpilot_p_inoc_scaffold_69939_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(408..1052)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 6.50e-89
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter denitrificans RepID=M4NCA8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 4.70e-89
DNA/RNA helicase, superfamily II, SNF2 family similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 1.30e-89

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GAAGGGCCGCTGTCGGCCACCTTCAGTCGCGCGGTGGCGCTGGCGCGCGAGGAACTGCCGCTGCTGCGGCTCGACCATCCGATGATCGCCGGCGCGCTGGACCTCGCGCTGTCCGGCGAACAGGGCAACGCCGCCTTCATGGTGGACGACATGCTGCCGCCGCGCAGCGCGCTGCTGCAGAGCGTGTTCGTGCTGGAGTGCGTGGCCGACCGCCGGCTCGATGCGGAGCGTTTCCTGCCCGCGCTGCCGATCACCGTCACCATCGACACGAAGCTCGTCGAGCGCGAGGACTTCCAGCCCAGCGACACCGCGCTGCGCAAGGCCGCCGACCGCAACATCGAGGTGCCGCGCTACCGCAAGTTCCTCGCCAAGCTGGTACCGCCGATGCTGGAGAAGGCCGAGCAGACGGCGCGCAGCCGCGCGCAGGCGATGATCGACGATGCAGTGGCCGAGGCCGGCGCCACACTGGACGCCGAACTGTCGCGCCTGCAGGCACTGCGCACGGTGAACCCGTCGATCAGTGCGGCGGAAATCGCCACCGTCGCCGCCGAACGCGACGCCCTGCTCGCCGCCCTGCCGCAGTCGCGGCTGCGCCTGGATGCGGTGCGTTTCGTGGTGAGCGCGGATTTCCTGGCGCTGCGCTGA
PROTEIN sequence
Length: 215
EGPLSATFSRAVALAREELPLLRLDHPMIAGALDLALSGEQGNAAFMVDDMLPPRSALLQSVFVLECVADRRLDAERFLPALPITVTIDTKLVEREDFQPSDTALRKAADRNIEVPRYRKFLAKLVPPMLEKAEQTARSRAQAMIDDAVAEAGATLDAELSRLQALRTVNPSISAAEIATVAAERDALLAALPQSRLRLDAVRFVVSADFLALR*