ggKbase home page

scnpilot_p_inoc_scaffold_65662_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..565

Top 3 Functional Annotations

Value Algorithm Source
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207};; TaxID=1410620 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 379
  • Evalue 2.00e-102
cysJ; sulfite reductase [NADPH] flavoprotein subunit alpha (EC:1.8.1.2) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 187.0
  • Bit_score: 306
  • Evalue 5.70e-81
Sulfite reductase flavoprotein alpha-component CysJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTD9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 379
  • Evalue 1.40e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GATGGCCGCGACCGCGGCGGCGTCTGCTCGACCTTCCTCGCCGACCGCGTGGCCGAAGGCTCAAGCGCCGGCATCTTCGTCTCGCAGAACAAATCCTTCCGCCTGCCCGCCGACAATGACGCGCCCGTCATCATGGTCGGCCCGGGCACCGGCGTCGCCCCGTTCCGCGCCTTCCTTCAGGAGCGCCGCGCCCGGGGCGCGAAGGGCCGCAACTGGCTGTTCTTCGGCGACCAGCACCGCGACAGCGATTTCATCTACGCCGACGAACTGTCCGAGATGAGCCGCGACGGGCTCTTGACGCGCCTCGACCTCGCCTTTTCCCGCGACCAGCAGGAAAAGATCTATGTGCAGACCCGCATGCGCGAACACGGCAAGGCGCTCTTTACCTGGCTGGAGGAAGGCGCCGCCTTCTATGTCTGCGGCGATGCCAGCCGCATGGCGCGCGACGTCGATACGGCGCTGACCGAGATCATCGCCACCCATGGCGGTCTCCCGGACGACCGCGCCGCCGATTATGTCGCCCGGCTGAAGCGGGAAAAAAGGTACCTGCGCGATGTCTACTGA
PROTEIN sequence
Length: 188
DGRDRGGVCSTFLADRVAEGSSAGIFVSQNKSFRLPADNDAPVIMVGPGTGVAPFRAFLQERRARGAKGRNWLFFGDQHRDSDFIYADELSEMSRDGLLTRLDLAFSRDQQEKIYVQTRMREHGKALFTWLEEGAAFYVCGDASRMARDVDTALTEIIATHGGLPDDRAADYVARLKREKRYLRDVY*