ggKbase home page

scnpilot_p_inoc_scaffold_73746_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 616..1008

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Actinoplanes globisporus RepID=UPI00036F3CC2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 131.0
  • Bit_score: 104
  • Evalue 6.30e-20
Sugar transport integral membrane protein {ECO:0000313|EMBL:CCH17099.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospor similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 96.0
  • Bit_score: 103
  • Evalue 2.60e-19
putative ABC-type sugar transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 116.0
  • Bit_score: 99
  • Evalue 7.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGTCGCGATCGGAAGGATTGTCGACCAGATCGCTCGAGACCCGGAGCGCAGCGCCGCTCCGGGCGTCGGGTTTCCGCTGGCCCCGCGAATGGACGCCCTATCTTTTCATCGCGCCGCTCGTCGTCTATCTGCCGGCGGTCTTCGCCTATCCCCTGTTCTACAATGCCCTGATCAGCTTTCAGAATTTCACGATCCGCTCGGTCGTCACCGGTGCGGCGGATTTTGTCGGGCTCGACAATTTTCGTGCGATCCTGAGCAACCCGGTGACCTGGCTGGCGCTGCGGAACACCGCGATTTTCGCGGCATCCTCGCTTTTCCTCCAATATGTGATCGGCCTTGCCCTTGCGCTGTTGTTCACGCGCGCCTTCCCGCTCAAGGGTTTCATGCGCGGG
PROTEIN sequence
Length: 131
MSRSEGLSTRSLETRSAAPLRASGFRWPREWTPYLFIAPLVVYLPAVFAYPLFYNALISFQNFTIRSVVTGAADFVGLDNFRAILSNPVTWLALRNTAIFAASSLFLQYVIGLALALLFTRAFPLKGFMRG