ggKbase home page

scnpilot_cont_500_p_scaffold_226

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_226_31
unknown

Not on your lists

comp(31122..31787)
DNA (666bp) protein (222aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_32
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32102..33916)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTZ1_METTR
Uncharacterized protein {ECO:0000313|EMBL:AHY54080.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
scnpilot_cont_500_p_scaffold_226_33
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34175..35581)
DNA (1407bp) protein (469aa)
DNA polymerase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KHV4_9SPHN
DNA polymerase {ECO:0000313|EMBL:KKC40882.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
phage SPO1 DNA polymerase-like protein
scnpilot_cont_500_p_scaffold_226_34
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35695..37764)
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000360BAA5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL28884.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
von Willebrand factor A
scnpilot_cont_500_p_scaffold_226_35
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37764..38342)
DNA (579bp) protein (193aa)
Putative RNA polymerase sigma factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R924_PELHB
RNA polymerase sigma70 {ECO:0000313|EMBL:KFL28885.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative RNA polymerase sigma factor
scnpilot_cont_500_p_scaffold_226_36
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38580..38765
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC34173.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
scnpilot_cont_500_p_scaffold_226_37
unknown

Not on your lists

38778..38963
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_38
unknown

Not on your lists

comp(38950..39867)
DNA (918bp) protein (306aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_39
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40039..41190)
DNA (1152bp) protein (384aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; H
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R926_PELHB rbh
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
scnpilot_cont_500_p_scaffold_226_40
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41358..43070
DNA (1713bp) protein (571aa)
Peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HF88_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB86439.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
flagellar hook-length control protein
scnpilot_cont_500_p_scaffold_226_41
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43080..43739
DNA (660bp) protein (220aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R928_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB12601.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
flagellar basal body rod modification protein FlgD
scnpilot_cont_500_p_scaffold_226_42
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43939..44217
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R929_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB75981.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_226_43
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44378..46093
DNA (1716bp) protein (572aa)
Flagellar M-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R930_PELHB rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.
flagellar M-ring protein FliF
scnpilot_cont_500_p_scaffold_226_44
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46102..47184
DNA (1083bp) protein (361aa)
Flagellar motor switch protein FliG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R931_PELHB rbh
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia li
flagellar motor switch protein FliG
scnpilot_cont_500_p_scaffold_226_45
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47181..47831
DNA (651bp) protein (217aa)
FlbE protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R932_PELHB
FlbE protein {ECO:0000313|EMBL:CDP53077.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
FlbE protein
scnpilot_cont_500_p_scaffold_226_46
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47828..48151
DNA (324bp) protein (108aa)
Flagellar motor switch protein FliN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R933_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB75985.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
flagellar motor switch protein FliN
scnpilot_cont_500_p_scaffold_226_47
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48161..49528
DNA (1368bp) protein (456aa)
Transcriptional regulatory protein flbD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R934_PELHB rbh
ATPase AAA {ECO:0000313|EMBL:KFL28895.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulatory protein flbD
scnpilot_cont_500_p_scaffold_226_48
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49595..51721
DNA (2127bp) protein (709aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R935_PELHB rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CDP53074.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
flagellar biosynthesis protein FlhA
scnpilot_cont_500_p_scaffold_226_49
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(51718..52779)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036245ED
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_226_50
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52894..54012
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034BF54F
Uncharacterized protein {ECO:0000313|EMBL:KFC62426.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_226_51
unknown

Not on your lists

54098..54493
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_52
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54495..55868)
DNA (1374bp) protein (458aa)
L-serine dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R948_PELHB rbh
L-serine dehydratase
L-serine dehydratase {ECO:0000313|EMBL:AEQ52428.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium hal
scnpilot_cont_500_p_scaffold_226_53
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56015..56713
DNA (699bp) protein (233aa)
Mll3685 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FN8_RHILO
PRC-barrel domain protein {ECO:0000313|EMBL:KFC62424.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_226_54
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56817..57248
DNA (432bp) protein (144aa)
acetyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003670C3E
Acetyltransferase {ECO:0000313|EMBL:KKB12589.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_226_55
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57300..57710)
DNA (411bp) protein (137aa)
Flagellar protein FliJ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R946_PELHB
Flagellar export protein FliJ {ECO:0000313|EMBL:KKB86427.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 1
flagellar protein FliJ
scnpilot_cont_500_p_scaffold_226_56
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57755..59077)
DNA (1323bp) protein (441aa)
Flagellum-specific ATP synthase FliI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R945_PELHB rbh
ATP synthase {ECO:0000313|EMBL:KFL28901.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
flagellum-specific ATP synthase FliI
scnpilot_cont_500_p_scaffold_226_57
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59460..60170
DNA (711bp) protein (237aa)
Two-component cell cycle transcriptional regulator ctrA, winged helix family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R944_PELHB rbh
Cell cycle transcriptional regulator CtrA {ECO:0000313|EMBL:CDP53067.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
two-component cell cycle transcriptional regulator ctrA, winged helix family
Displaying items 31-57 of 57 in total

View Taxonomy