ggKbase home page

scnpilot_cont_500_p_scaffold_247_21

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 20700..21299

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Cro/CI family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFZ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 188.0
  • Bit_score: 321
  • Evalue 6.50e-85
  • rbh
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EYR79309.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 188.0
  • Bit_score: 321
  • Evalue 9.10e-85
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 199.0
  • Bit_score: 248
  • Evalue 1.20e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCGTCTGAGAGCGGTCCCGAAACCGGGCTGGGATCTGTTGGCGGCGATCCGGTTCTTGGGGATCGCATTCGTGGTTTGCGCAAACGGCGCAAGATGACGCTTTCGCAGTTGTCGGAAAGCGCCAACCTTTCCATCGGCTACATCAGCCAGATCGAGCGTAACCTTGCCTACCCATCGATTCCGGCGCTGGTGAACATCGCCCGAAGCCTGGGCGTGACCGTGCAGTGGTTTTTCGCTGGCGCCTCTCCCGTGCCGCAGGAAGAGCATGGCTATGTCGTCAGGAGCGGCAACCGCCTGAAGATACAGTATGAGGGCGGTATCATCGACGAGCTCGTCACGCCGAAGATGAGCCTGCAGGTGGAGATGATCTATACGCGGCTGCCGCCGGGAACCGAAAGCGCCGAAAGCTACACCCACGAGGGCGATGGCGTCGGCTTCGTCGTCTCGGGTGAACTCGACATCTGGGTCGGCGAGCGACATTTCCACCTCTATGAAGGAGACAGTTGCTCCTATTCGTCAGGCGAGCCGCACAGGTACAAGAATTCGGGCGAGCGAGAGGCCGTCGTGATCTGGGCAATCAGCCCGCCAAGCTTCTAG
PROTEIN sequence
Length: 200
MSSESGPETGLGSVGGDPVLGDRIRGLRKRRKMTLSQLSESANLSIGYISQIERNLAYPSIPALVNIARSLGVTVQWFFAGASPVPQEEHGYVVRSGNRLKIQYEGGIIDELVTPKMSLQVEMIYTRLPPGTESAESYTHEGDGVGFVVSGELDIWVGERHFHLYEGDSCSYSSGEPHRYKNSGEREAVVIWAISPPSF*