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scnpilot_cont_500_p_scaffold_172_18

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(16774..17295)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator of the SARP family n=1 Tax=Rhizobium sp. CF142 RepID=J2L6L1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 170.0
  • Bit_score: 253
  • Evalue 1.90e-64
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:EJJ28674.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 170.0
  • Bit_score: 253
  • Evalue 1.50e-64
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 171.0
  • Bit_score: 226
  • Evalue 7.00e-57

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGGCGGGCCGGGTGCTGGCCATCGAGCGGCTGGCGGAGATCGCGCTGGAGCGCGGCCAGAAATGGCGCGCCGGCCGGCTGATACAGCGCGGGCTCGCGGATGCCGAGCGCTCGTGGCTGTCGCCGCATCTCATCATGCGCATGCAGGCGCTGGCGGTTCGCGCGGCCGCGACGCCGAAGATGGTGGCGGAGGAGATTCTGGCCGGCGACAGGCTGATGACGCCCGGCGCCTGCCAACCTTGCTCGATGGCGCTGCGCACCGCCTCGGCTATCGCGCTCGCCGAGGCCGGCAAGCTGGAAGAGGTCGACCACCGGCTGAACGAGGCCGAGCGCATCGCCGGCATGTGGCATGGCGGGCCGTGGGCCGCGGCGCTGTGGGAGGCGCGCGGCGTGCAGCGACGCGCGCAGAAGAAGGAAGTGCGCGCGCTGGCCGCCTTCGAGGAGGCCGCCTCGCGCTACGAGGAGCTCGGCCGGCCCCGCGACCAGGCCCGCTGCCTTGCGCGCATGGGCCCCGAGGGGTAG
PROTEIN sequence
Length: 174
VAGRVLAIERLAEIALERGQKWRAGRLIQRGLADAERSWLSPHLIMRMQALAVRAAATPKMVAEEILAGDRLMTPGACQPCSMALRTASAIALAEAGKLEEVDHRLNEAERIAGMWHGGPWAAALWEARGVQRRAQKKEVRALAAFEEAASRYEELGRPRDQARCLARMGPEG*