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scnpilot_cont_500_p_scaffold_172_184

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(186097..186681)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhizobium loti RepID=UPI00037D814E similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 173.0
  • Bit_score: 280
  • Evalue 1.60e-72
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 173.0
  • Bit_score: 279
  • Evalue 5.90e-73
RNA polymerase sigma factor {ECO:0000313|EMBL:ESY90920.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 172.0
  • Bit_score: 279
  • Evalue 3.00e-72

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
TTGAACGAGACGAGCGCCCGGGCCGGCGGTTCCCCGCCGGCCGGTGACGGACTGGCGCGGGCCGACCGCTTCAGCCAGGTGGTGCTGCCGTATCTCGCGGACGCGCTGTCCCTGGCGCGCTGGTTGACGGGCAATGCCGCCGATGCCGAGGACGTGGTCCAGGAGGCCTGCATCAAGGCGCATGCCGGCATCGCCGGCTATGCCGGCGGCAATGCCAGGGCCTGGCTGCTGACCATCGTGCGCAACACCGCCTATTCGTGGATGGCGCGCAACCGCCCGCGCGCGGTGATGGCCGTCGGCGATCTAGCCGACCTCGACGAGGTGACGGCGGTGCACGGCGGCGTGGTCGACATGGGTGAGGGACCGGAGGCCGGGCTGATCGCCAGGGCCAATGCCGCGGCGCTCGAGGCGGCAATCGCGGCGCTGCCACAACCATTTCGCGAGACGCTGGTGCTGCGCGACATAAACGGCCTCAGCTATCGCGAGATATCGGACATGCTCACCGTGCCGATCGGCACGGTAATGTCGCGGCTGGCCCGCGCGCGCGGCCTGCTGATGTCGGAACTTGGAGAACGCCATGCATGA
PROTEIN sequence
Length: 195
LNETSARAGGSPPAGDGLARADRFSQVVLPYLADALSLARWLTGNAADAEDVVQEACIKAHAGIAGYAGGNARAWLLTIVRNTAYSWMARNRPRAVMAVGDLADLDEVTAVHGGVVDMGEGPEAGLIARANAAALEAAIAALPQPFRETLVLRDINGLSYREISDMLTVPIGTVMSRLARARGLLMSELGERHA*