ggKbase home page

scnpilot_cont_500_p_scaffold_1923_13

Organism: SCNPILOT_CONT_500_P_Mesorhizobium_64_5.0

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 10583..12190

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2L4F0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 534.0
  • Bit_score: 821
  • Evalue 5.40e-235
  • rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EUB98516.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 534.0
  • Bit_score: 821
  • Evalue 7.50e-235
peptide ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 535.0
  • Bit_score: 731
  • Evalue 2.10e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1608
ATGAAATCGATTGTCGGCCTGACATTTGCAGCCTTGCTGGCCTCGTCGCCGGTCTATGCGTCGACGCTGTCCGTCTGCATCGAGGGGTCGCCCGAGATATTCAATCCGGAGCTCTCAAGCAGCGGCACGACCTTGTTCGTGCTTGGCCAGATCTACGACAATCTGGTGTCCGTGAAGCAGGGTTCTTCAGAGATCGAGCCCGCGCTGGCTGAAAGCTGGACCGTTTCCGCCGATGCGAAGACCTATACGTTCAAGCTGCGCAAGGGCGTGAAGTGGCAATCGAACGATGCCTTCACGCCCAAGCGTGACTTCAACGCCGACGACGTGGTCTTCACCTTCCAGCGCATGATGGACCCGGCCAATCCCTATTCCAAGGTCAATGGCGGCGAATACACCACCTTCCAGACACGGCTTGCCGATACGCTGCAAAGCGTGAAGAAGATCGACGACGACACCGTCGCCTTCACGCTGAAGGAGCCGCTGGCGCCGTTTATCGGCATCATGGCGCACCAATCGCTCGCCATCACGTCGGCGGAATATGCCGATGCCATGTCCAAGGCTGGCACGCCGGAGCAATTCGATCGCCAACCGATCGGAACCGGCGCCTTCCAGTTGCAGGATTATCAGGCCGACACTGCCGTGCGCCTGATCCCGTTTGCCAACACCTGGGGCGCGGCCATCGGCGACGAATCCCGCACGCCGAAGGTCGACGCTGTCGTCATGGCGATCAGCACCGACGCCACGGTTCGCCTGCAGCGCGCCATGGCGGACGAATGTCAGATCGCTCTCTATCCCAACCTCGCCGATCGCGAGACGATCGAGAAGAGCGGCAATCTCAACCTGGTCCGCACGCCAGTGGCATCGACCGGCTTCATCACCTTCAATTTCAACGACGACGCGTTGAAGAACAAGAAAGTGCGCGAGGCGCTGGCGCACGCGATCGACATCAAGCCGCTGGTGGATGTCGTCTACGACGGCATGGGCAAGGCCACGGGATCGCTCATTCCTCCCGCCCTGTGGGGTTTCGATGAGAAGATCGCTCCCTACGACTACGATCCGCAAGAGGCCAAGGCCCTGCTCAAGGAGGCCGGCTATCCCGATGGGTTCTCAACGCAGATCTGGGCGGTCCCGGTCTCACGCCCCTACATGCCGCACGGACGTCGCGCGGCCGAGATGATCCAGGCGGACTGGGCAAAGATCGGCGTCAAGGCCGAGATCGTGTCGTACGAATGGGCGGAATACATCAAGCGCTCCGTTTCCGGAGAGTCCAAGGTGGGCATGTTCGGTGGCATCTGGGACTTCCCGGATCCGAGCGAGATACCGAACAACTATTTCACCTGCGATTCGTCCGGCAAGCCGAGCCCGTCCAACATCGGCGGCTGGTGCAACAAGGACTTCAACGCCCTCATGAACCAGGCCGGCGCGATTACCGACCAGCCGCAACGCGAGAAACTGTACAAGCAGGCGGAGCAGGTGTTCCATGACGAAGTGCCGGCCGTGATCCTGGGCAGCGCGGACGCGATCACCGCCGTCAGCAAGAAGGTCAAAGGCTACAAGGAAGCCAATTTCGGCACGAGCCGGTTGGCCGGCGTGACGGTAGAGGAATGA
PROTEIN sequence
Length: 536
MKSIVGLTFAALLASSPVYASTLSVCIEGSPEIFNPELSSSGTTLFVLGQIYDNLVSVKQGSSEIEPALAESWTVSADAKTYTFKLRKGVKWQSNDAFTPKRDFNADDVVFTFQRMMDPANPYSKVNGGEYTTFQTRLADTLQSVKKIDDDTVAFTLKEPLAPFIGIMAHQSLAITSAEYADAMSKAGTPEQFDRQPIGTGAFQLQDYQADTAVRLIPFANTWGAAIGDESRTPKVDAVVMAISTDATVRLQRAMADECQIALYPNLADRETIEKSGNLNLVRTPVASTGFITFNFNDDALKNKKVREALAHAIDIKPLVDVVYDGMGKATGSLIPPALWGFDEKIAPYDYDPQEAKALLKEAGYPDGFSTQIWAVPVSRPYMPHGRRAAEMIQADWAKIGVKAEIVSYEWAEYIKRSVSGESKVGMFGGIWDFPDPSEIPNNYFTCDSSGKPSPSNIGGWCNKDFNALMNQAGAITDQPQREKLYKQAEQVFHDEVPAVILGSADAITAVSKKVKGYKEANFGTSRLAGVTVEE*