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scnpilot_p_inoc_scaffold_105_65

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 79089..79655

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7718418 bin=BACIGN_2 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 376
  • Evalue 1.20e-101
  • rbh
RNA polymerase sigma factor, sigma-70 family Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 184.0
  • Bit_score: 194
  • Evalue 1.60e-46
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 189.0
  • Bit_score: 114
  • Evalue 4.20e-23

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Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 567
GTGCTACCCAGCAATCATCATAGCGCCCGGTCGATCAGCGACGAAGAGCTCGCCCTGATCCTCGCTGCCTTCCGAAGCGGGGATCGTGATGCCTTCCGTTCGCTCTACGATCAGTTCCACAGCAAGATCTACCGGTTCTGCAGGCGCATGACGAATGACGACGCGTTGGCCAAGGACGCTTTTCAGGAAACCTTCATCCGTATGTACGAACATCGCAGGGAACTGCGTGGCGACAACGTGCGCTCGTGGCTGTTCTCCATAGCCCGACGCACCTGCCTCAATCTGCTGCGCACGCGCAGGGCGAGCCACGAACCCTTCGATGAGACGTTCCATGCCCATCCCGACGTCGTGGATCACGATGTCATCCTCAAGGAACGTATCGAGCAGGCGCTGACGCATCTGCCCATCGCCCTGAGAGAGGCGCTCGTACTTCGTGAATATGAAGGCCATTCCTACCAGGAAATCGCCGATATCGTCGGTATCGATCTTTCACTGGCCAAGGTCCGCGTCTATCGCGCACGACTGATGATGCGCAAACTACTGGCTCCGGTACTCAACGAACGATGA
PROTEIN sequence
Length: 189
VLPSNHHSARSISDEELALILAAFRSGDRDAFRSLYDQFHSKIYRFCRRMTNDDALAKDAFQETFIRMYEHRRELRGDNVRSWLFSIARRTCLNLLRTRRASHEPFDETFHAHPDVVDHDVILKERIEQALTHLPIALREALVLREYEGHSYQEIADIVGIDLSLAKVRVYRARLMMRKLLAPVLNER*