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scnpilot_p_inoc_scaffold_378_28

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(39843..40925)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit id=7718799 bin=BACIGN_2 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 683
  • Evalue 9.00e-194
  • rbh
Toluene efflux pump periplasmic linker protein TtgA {ECO:0000313|EMBL:KHJ37586.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 365.0
  • Bit_score: 287
  • Evalue 2.60e-74
cation transporter similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 362.0
  • Bit_score: 260
  • Evalue 5.30e-67

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAACAAAAAAGTACTGATCTGGACGATTGTGGTGGCCGTGGCCATCGGTGCATTCTTCCTCATCCGCTCCCTTACAGGTACGTCGGCGGCCAGGGGACCCGGTGCGGGAACACCACCGGGTGGACCGGGTGGCGTCAAGGCGGGTCCGGTTTCCGTTCGTGGAATCGTCGTCCAGCCGTCGTCGTTCGACGAATCGATCACGCTGACGGGCAGCATCATGGCCAACGAATCGGTCGAGATCCGCAGCGAAGTCAGCGGTCGTATCATCAAGCTCGGTTTCCAGGAGGGGGGGCTCGTGCGCAAGGGGCAGCTTCTGGTGAAGCTGTTCGATGCCGACCTGCGTGCCCAGCTCGCCAAGGCCCGCCAGCAACTGAAGATCGATGAGGACAAGATGCGTCGCTATGCCGAGCTGAAGCGCGTCGACGGCGTGAGCACGGAAGAGTACGAAGTGGCGGCTGCCCAGGTCGAGATGCGCAAGGCCGAGATCGACGTCCTGCTCGCCCAGATCTCCCGCACGGAAATCCTCGCTCCGTTCTCCGGACGCATAGGATTGAGGCAAGTCAGCGACGGCGCCGTCATCACGACGAATACCCTGATCGCCGTCCTGGCCGATGAACAGCAACTCAAACTCGAATGCTCGATTCCCGAACGCTATGCGTCAACCGTGGCTCTGGGCAAGAGCCTGTCGTTCCGCACACGCGGACGCGATACGATGCAGGGCAGGGAAGCCGTGATCTATGCCATCGACCCTGCGGTCGAAGCGAGTACGCGTACGCTGAAGATCCGCGCTCGCTGCAAGGATTCCCGTGGTCTCGTCGCAGGAATGTTCGCCGACATCAATCTTCCCCTGTCTACGGTGAGCGATGCCCTGCTCGTCCCGACCGAGGCCATCGTACCCGACCTCAACGGAACGAAGATCTTTGTCCAGCGCGGCGGCGTGGCCCGCCCAGTCTTCGTCGAAACGGGTGGCCGCACCCCAACGATGGTGAGGATCTCGTCCGGTATCGCCGCAGGCGATACGGTGCTGACGACGGGTCTGCTGCTGCTCAAGCCCGGTTTACCTGTCAAGACGGAGTTGTGA
PROTEIN sequence
Length: 361
MNKKVLIWTIVVAVAIGAFFLIRSLTGTSAARGPGAGTPPGGPGGVKAGPVSVRGIVVQPSSFDESITLTGSIMANESVEIRSEVSGRIIKLGFQEGGLVRKGQLLVKLFDADLRAQLAKARQQLKIDEDKMRRYAELKRVDGVSTEEYEVAAAQVEMRKAEIDVLLAQISRTEILAPFSGRIGLRQVSDGAVITTNTLIAVLADEQQLKLECSIPERYASTVALGKSLSFRTRGRDTMQGREAVIYAIDPAVEASTRTLKIRARCKDSRGLVAGMFADINLPLSTVSDALLVPTEAIVPDLNGTKIFVQRGGVARPVFVETGGRTPTMVRISSGIAAGDTVLTTGLLLLKPGLPVKTEL*