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scnpilot_p_inoc_scaffold_16225_3

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 1394..2614

Top 3 Functional Annotations

Value Algorithm Source
ispG, gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 404.0
  • Bit_score: 747
  • Evalue 1.40e-212
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 405.0
  • Bit_score: 740
  • Evalue 3.40e-211
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713503 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 404.0
  • Bit_score: 757
  • Evalue 5.50e-216
  • rbh

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGTCTCAGATAGTCCGTCGTCCCAGCCGCCAGGCGCAGATCGGTCATGTGCCGGTCGGCGGCGATGCGCCGGTGGTGGTGCAGTCGATGACCAATACCGACACCGTCGATATCGGCGCCACCGTGCGCCAGGTGCAGGCGCTGGCCGAGGCCGGCTCCGAGCTGGTGCGGCTCACCGTCAATACCCTCGAGGCCGCCGCCGCGGTGCCGCGCATCCGCGAGCGGCTCGACGTGCTGGGCTGCCGCGTGCCGCTGATCGGCGACTTCCACTTCAACGGCCACAAGCTGCTGACCCAGGTCCCGGAATGCGCGCAGGCGCTGGCGAAGCTGCGCATCAATCCGGGCAACATCGGGCGCGGCAACAAGCGCGACGAACAGTTCGCCACCCTGATCGAAACGGCGTGCCGCTACGACAAGCCGGTGCGCATCGGCGTCAACTGGGGCAGCCTCGACCAGGCGCTGGCGGCGCGCATGATGGACGACAATGCGCGTCTGGCGCGGCCGGAAGACGCCGAAGTGGTGATGCGCCGCGCGATGGTGGCGTCCGCGCTGGAATCGGCGAAGAAGGCCGAAGAGCTGGGCCTCGGCGGCGACAAAATCATCCTGTCGTGCAAGATGAGCCGGGTGCAGGACCTGATTTCCGTATACCGCGATCTCGCCGCGCAGTGCGACTATCCGCTGCACCTCGGGCTGACCGAGGCCGGCATGGGCAGCAAGGGCATCGTCGCCTCGACCGCCGCGCTGGCGGTGCTGCTGCAGGAAGGCATCGGCGACACCATCCGCATTTCGCTGACCCCCGAACCGGGTGGAGAACGCACCCAGGAGGTCCGTGTCGGCCAGGAAATCCTGCAGGCACTCGGCCTGCGCGCCTTCACCCCGCAGGTCACCGCCTGTCCCGGCTGCGGCCGCACCACCTCGACCGTGTTCCAGGAACTGGCGCAGGACATCGAGACGTTTCTGCGCACCCAGATGCCGCTGTGGCGCAGCCAGTATCCTGGCGTCGAGTCCATGCAGGTGGCGGTGATGGGCTGCGTGGTCAACGGCCCCGGCGAATCCAAGCACGCCAACATCGGCATCTCGCTGCCCGGCACCGGCGAAGTGCCGGTGGCGCCGGTGTACGTCGACGGCGAGAAAACCGTGACGCTGAAGGGCGAGCGCATCGCCGCGGACTTCCAGGCGATCGTCGAGGACTACGTGCGCAGCCATTACGGCGCTGCGTGA
PROTEIN sequence
Length: 407
MSQIVRRPSRQAQIGHVPVGGDAPVVVQSMTNTDTVDIGATVRQVQALAEAGSELVRLTVNTLEAAAAVPRIRERLDVLGCRVPLIGDFHFNGHKLLTQVPECAQALAKLRINPGNIGRGNKRDEQFATLIETACRYDKPVRIGVNWGSLDQALAARMMDDNARLARPEDAEVVMRRAMVASALESAKKAEELGLGGDKIILSCKMSRVQDLISVYRDLAAQCDYPLHLGLTEAGMGSKGIVASTAALAVLLQEGIGDTIRISLTPEPGGERTQEVRVGQEILQALGLRAFTPQVTACPGCGRTTSTVFQELAQDIETFLRTQMPLWRSQYPGVESMQVAVMGCVVNGPGESKHANIGISLPGTGEVPVAPVYVDGEKTVTLKGERIAADFQAIVEDYVRSHYGAA*