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scnpilot_p_inoc_scaffold_44306_2

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: comp(233..1051)

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel family protein; K03442 small conductance mechanosensitive channel id=12496189 bin=THIO_MID species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 273.0
  • Bit_score: 480
  • Evalue 1.50e-132
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAM10807.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 270.0
  • Bit_score: 426
  • Evalue 3.60e-116
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 268.0
  • Bit_score: 423
  • Evalue 3.60e-116

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Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGACAAGGACATTCAGCATTACACCGACATCGCCGCCGCCTACGCCACCGAGGCGGGGTTGAAGATCCTTGCCGCTATTGCCTTCTGGATCATCGGCCGCTGGCTGATCGGACTGGTCGGGCGCATGTTGCAGGCGGCGCTGGGCAGGCAAAAGGTCGATTCCACACTGATGCGCTACATCGGCAGCTTCGTCGCGGTCACCCTCAACATCGTGCTGGTGGTCGCCATCCTCGGCTACTTCGGGGTGCAGACGACGACCTTCGCCGCCCTGGTCGCCGGCATCGGCATCGCCATCGGCGCCGCCTGGGGCGGGCTGCTGTCCAACCTGGCCGCGGGCGCCTTCCTCATCGTGCTGAAGCCGTTCAAGGTGGGCGACTTCATCACCGCCGGCGGCGTCACCGGCACGGTCAGGGAAATCGGCCTGTTCGCCACCGGCCTCGACACCCCCGACAACGTGTTCACCATCATCGGCAACGGCAAGATCTTTGGCGACACCATCCAGAACTTCAGCACCAATGCCTTCCGCCGCGTCGAGCTGAAATGCCAGCTCGCGGGCAGCGCCGACCACGTCGCCGCCATGCAGCTGCTGCGCGACAAGCTGCAGGCGATTCCCAACGTGCTGGCCGAGCCTGCGGTGGAAGTCGAAATCCTCGAATTCAACCTGGTCGGGCCGGTGCTCGCGGTGCGCCCGTTCTGCCACACCGACCATTACTGGCAGGTGTATTTCGACGGCAACCGCGTCATCCGCGAAGCGCTGGCCGCAGCCGGCTTCCCGGCGCCGATGCCGGCGCAGCTGATGCTCACCCGCGCGGCTTGA
PROTEIN sequence
Length: 273
MDKDIQHYTDIAAAYATEAGLKILAAIAFWIIGRWLIGLVGRMLQAALGRQKVDSTLMRYIGSFVAVTLNIVLVVAILGYFGVQTTTFAALVAGIGIAIGAAWGGLLSNLAAGAFLIVLKPFKVGDFITAGGVTGTVREIGLFATGLDTPDNVFTIIGNGKIFGDTIQNFSTNAFRRVELKCQLAGSADHVAAMQLLRDKLQAIPNVLAEPAVEVEILEFNLVGPVLAVRPFCHTDHYWQVYFDGNRVIREALAAAGFPAPMPAQLMLTRAA*