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scnpilot_p_inoc_scaffold_57799_1

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: 3..323

Top 3 Functional Annotations

Value Algorithm Source
Acr/RND family transmembrane transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FB33D similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 2.10e-50
transmembrane drug efflux protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 192
  • Evalue 6.80e-47
Probable transmembrane drug efflux protein {ECO:0000313|EMBL:AAZ98484.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 192
  • Evalue 3.40e-46

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
TTCGTCGCGCTGCTGGGGATCATCTCGCTGGCCGGCATGATCATGCGCAACTCGGTGATTCTGGTCGACCAGATCCAGCAGGACATCGCGCGCGGCCTGTCGCAATGGGATGCGATCATCGAGTCGACGGTACGGCGGATGCGCCCGATCAGCCTCACCGCCGCTGCCGCGGTACTGGCGATGATCCCGCTGTCGCGTTCGATTTTCTGGGGGCCGATGGCGGTGTCGGTCATGGGCGGCCTGGTCGCGGCGACCTTTCTCACCCTATTTTTCCTGCCGGCCTTGTATGCGGCGTGGTTTAGGGTTAAACCAAATCAATAG
PROTEIN sequence
Length: 107
FVALLGIISLAGMIMRNSVILVDQIQQDIARGLSQWDAIIESTVRRMRPISLTAAAAVLAMIPLSRSIFWGPMAVSVMGGLVAATFLTLFFLPALYAAWFRVKPNQ*