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scnpilot_p_inoc_scaffold_107_200

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 227323..228033

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 239.0
  • Bit_score: 361
  • Evalue 7.20e-97
RNA pseudouridine synthase n=1 Tax=Dyella japonica RepID=UPI000306E034 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 239.0
  • Bit_score: 361
  • Evalue 5.10e-97
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 239.0
  • Bit_score: 361
  • Evalue 1.40e-97

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCGCCTCAACAAGTACATCAGCGACACCGGCCTTTGCTCGCGGCGCGAAGCCGACGAACTCATCGAAAGCGGCCGGGTCACGGTCGACGGCCGCAAGGCCGCCGTCGGCGCGGTCGTCGAGGCCGGTGCGGAGGTGCTGGTCGACGGCAGTCCGCTCAAGCTCAAGAACCAGCGCGGCGGCGCCAAGTCGGTCTACATCGCACTGAACAAGCCAGTCGGCATCACCTGCACGACCGAGTCCGGCGTGAAGGACAACATCATCGACTTCGTCGACCACCGCGAGCGCATTTTCCCGATCGGCCGGCTCGACAAGGATTCCGAAGGGCTGATCCTGCTGACCAACAACGGCGACATCGTCAACGAGATCCTGCGCTCGGAGAATCGCCACGAGAAGGAATATCTCGTCGCCGTCAGCAAGCCGGTGACCGAGGAGTTTCTCAGCGGCATGGCCCGCGGCGTCCGCATCCACGGCCAGATGACCAAGCCGTGCAAGGTCTATAAATTGGGGAAATTTGGATTCCGCATCATCCTCACGCAGGGGCTGAACCGGCAGATCCGCCTGATGGCGGCGGAATTCGGCTACCGCGTGAAGCAACTGCGGCGCGTACGTATCGTCAACATCCGGCTCGGCAATCTGAAGCTGGGCCAATGGCGCAACCTGACACCGGCGGAACTGCGCGGCCTGCTGCCGCAGCGGACTCAGTGGTAG
PROTEIN sequence
Length: 237
MRLNKYISDTGLCSRREADELIESGRVTVDGRKAAVGAVVEAGAEVLVDGSPLKLKNQRGGAKSVYIALNKPVGITCTTESGVKDNIIDFVDHRERIFPIGRLDKDSEGLILLTNNGDIVNEILRSENRHEKEYLVAVSKPVTEEFLSGMARGVRIHGQMTKPCKVYKLGKFGFRIILTQGLNRQIRLMAAEFGYRVKQLRRVRIVNIRLGNLKLGQWRNLTPAELRGLLPQRTQW*