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scnpilot_p_inoc_scaffold_26_107

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(132077..132637)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSA5_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 186.0
  • Bit_score: 171
  • Evalue 7.80e-40
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 186.0
  • Bit_score: 171
  • Evalue 2.20e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB75704.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae ( similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 186.0
  • Bit_score: 171
  • Evalue 1.10e-39

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Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 561
GTGAGCGAGAACGGCGCGATTACCCGATTGTTGCAGCGTGCGGCCGCCGGCGAGATCGATGCCGAGCGCGAGCTGCTGCCGCTGGTCTATGCCGAGCTGCGCCGCGTCGCGGCGCGCCAGCTCGCCGGCGAACGCAGCGGACATACCCTGTCGCCGACCGCGCTCGTGCATGAGGCCTATCTGCGTCTGGCCACCGATGCGACCGCGGCGCCGGCCGACCGGCGCCAGTTCTTCGCGCTGGCGGCGCGGCGCATGCGCCAGGTGCTGATCGACCATGCGCGCGCGCGCGATGCGGCCAAGCGCGGCGGCGCGCAGCGCGAAGCCGTGACCTTGTCCGGCCTGCACAGCGACGATGCGGCCGGCGAAGTCGATCTGCTCGCGCTGGACCAGGCGCTGCAGCAGCTCGAACAGGCCGATCCGCGCAAGGCGCGCATCGTCGAGCTGCGCTATTTCGCCGGCCTGGAAATGACCGACATCGCCGAATTGCTCGGCATCTCGCGTGCGACCGCGCAGCGCGACTGGGAGGTCGCGCGGACCTTCCTGTTCCAGCAGCTGGCCTGA
PROTEIN sequence
Length: 187
VSENGAITRLLQRAAAGEIDAERELLPLVYAELRRVAARQLAGERSGHTLSPTALVHEAYLRLATDATAAPADRRQFFALAARRMRQVLIDHARARDAAKRGGAQREAVTLSGLHSDDAAGEVDLLALDQALQQLEQADPRKARIVELRYFAGLEMTDIAELLGISRATAQRDWEVARTFLFQQLA*