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scnpilot_p_inoc_scaffold_26_160

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(190677..191957)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WNY5_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 7.90e-173
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:EYR70252.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 426.0
  • Bit_score: 661
  • Evalue 7.90e-187
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 2.20e-173

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGGCCGCGACCCTGCTGTTCGGCGCCTTCCTGCTGTTGTTGCTCGCCGGCGTTCCGGTGGCTTTCTCGCTGCTCGGCGCTTCGCTGGCGACCCTGCTGTACATCGGCATGCCGGCACTCGTGCTCGTGCAGCAGACCGTATCGGGTGCGAGCGCCGCGTCGCTGATCGCGATTCCGTTGTTCATCTTCGCCGGCGAGATCATGCTGCGCGGCGGCATCTCCGAGCGGCTGATCGCACTGGCGAGTTCGCTGGTCGGCCATCTGCGCGGCGGGCTCGGCCAGGTCAGCGTGCTGTCGTCGCTGTTCTTCGGCGGCGTGTCGGGCTCGGCCATCGCCGACGTCTCGGCCATCGGCGGCGCGATGATCCCGCAGATGGTGCAGCGCGGCTTCGATCGCGACTTCGCCGTCAACGTGACGATGACCGCGGCGCTGGTCGCGCTGCTGGTGCCGCCGTCGCACAACCTGATTCTGTACTCGGCGGCAGCCGGCGGCGGCATCTCGATCGCCGACCTGTTCGCCGCCGGCGTGATCCCGGCCCTGCTGATGACCGCGACGGTGATGCTGACGGCCTGGCTGCTCGCGCGCCGGCGCGGCTATGCGGTCGAGGCGTTTCCGGGCTTCGCCATCGTGCTGCGCCGCTTCGCCGCGGCGTTGCCGGGCCTGCTGCTCGTCGCACTGATCTTCGTCGGCATCCGTGCCGGCGTGTTCACGGCGGTGGAGAGCGCCGCGATCGCGGTCTGCTACGCGCTGTTCGTGACGGCCGTGCTGTATCGCCAGGTCTCGCGCAGCGATTTCGTCGCCACGATGCTGCATGCGGCGCGCACGACCGGCATGATCCTGTTCGTGATCGCCTCGGCCGCCTGCTTCGGCTGGCTGCTGGCCTATCTGCAGGTGCCCGCAGCCGCGGTGGAACTGCTGACCGGTCTCGACGTCGGGCGTCACCTGCTGTTGCTGCTGATGATCCTGATCCTGCTCGCGCTGGGCACGTTCATGGACCTCGCGCCGCTGATCATCATCTGCACGCCGATCTTCCTGCCGGTGGCCAAGGCCATCGGCGTTGATCCGGTGCATTTCGGTGTGATCCTCATCCTCAAGGGCGGCATAGGCCTGATCACGCCGCCGCTGGGCTCGGTGCTGTTCGTCGGTACGGCCATCGGCAAGATCAGCATCGGCGAGGCCCTGCGTTCGATCTGGCCGTTCTATCTGGCTTCGCTGGCCATGCTGCTGCTGGTCGCCTTCGTTCCGGAGCTGTCGCTGTGGCTGCCGCGCGTGCTCAAGTAA
PROTEIN sequence
Length: 427
MAATLLFGAFLLLLLAGVPVAFSLLGASLATLLYIGMPALVLVQQTVSGASAASLIAIPLFIFAGEIMLRGGISERLIALASSLVGHLRGGLGQVSVLSSLFFGGVSGSAIADVSAIGGAMIPQMVQRGFDRDFAVNVTMTAALVALLVPPSHNLILYSAAAGGGISIADLFAAGVIPALLMTATVMLTAWLLARRRGYAVEAFPGFAIVLRRFAAALPGLLLVALIFVGIRAGVFTAVESAAIAVCYALFVTAVLYRQVSRSDFVATMLHAARTTGMILFVIASAACFGWLLAYLQVPAAAVELLTGLDVGRHLLLLLMILILLALGTFMDLAPLIIICTPIFLPVAKAIGVDPVHFGVILILKGGIGLITPPLGSVLFVGTAIGKISIGEALRSIWPFYLASLAMLLLVAFVPELSLWLPRVLK*