ggKbase home page

scnpilot_p_inoc_scaffold_26_242

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 288526..290220

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 523.0
  • Bit_score: 566
  • Evalue 4.60e-158
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW74_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 552.0
  • Bit_score: 559
  • Evalue 5.20e-156
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 531.0
  • Bit_score: 559
  • Evalue 1.10e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGACCGCTGCACCCCGCCGTACCCTCACCCTCAAACGCCCGCAGACCGACGAAGCCGCGCCGGCGATCGAGGAACGCCTGCACAAGGTCCTGGCCAATGCGGGACTCGGCTCGCGCCGGCTGCTCGAGCAGCGCATCCAGAACGGCGAGATCTCGGTCAACGGCACGCCGGCGACGATCGGCGTCAGCGTCAAGAGCGGCGACCGCGTCGAAGTCGACGGCAAGCTGTTCGTGGTGATCCGCGACGACGCCGAACAGGCGCAGGTGCTGGTCTACCACAAGCCCGAAGGCGTGGTGACCACGCGCGAAGATCCCGAAGGCCGCCCGACCGTGTTCGAACAGCTGCCGCGCCTGAAAGGCCAGCGCTGGATCGCCGTGGGCCGCCTCGACATCAACACAACCGGCCTGCTGCTGCTGACCACCGACGGCAATCTCGCCAACGCGCTGATGCACCCGTCCAGCGAGATCGAACGCGAATACATCTGCCGCGTGCATGGTGAAGTGCCCGACGAGGTGCTCGAACGGCTCAAGGCCGGCATCGAACTCGACGATGGTCCTGCGCATTTCGACGACATCGGCGTGATCAGCCGCAGCGGCAGCCATTCCTGGTTCCGCGTCGTGATCCGCGAAGGCCGCAACCGCGAAGTGCGCCGGCTCTGGGATGCGGCCGGCTTCCTCGTCAGCCGCCTCAAGCGGGTGCGCTACGGCACCGTGGAGCTGCCGCGGCCGCTCAAGCGCGGCCATTCGCAGGAACTCGACGCCGAAGACACGAAGGCGCTGCGCGAACTCTGCGGCGCGACGCAGAGCGAACCGACCCTGACCCTGCAGCCGGTCATCCATCAGCGCCGTGCGAGCCAGAGCGCGATCACCGAATACCGGCCGGCGCCGCGCGGCGGAGCGCAGCAGGCCTGGACCGGCGCCGACCGCGCCGAGGCGCGCGAACTGACCCGCTTCGACCGCATCCGCGACGACGGCCCGGCCCGTCCGGGCCGCCCGCGCGGTCCCAAGCGTTTCGGTCCCGGCGCCGGTGGCGGTGCAGGACGCGGCAACACGCAGGGTCGCGGCCAGCGCGTCGTCGACGGCAACACGGACAAGCCGCAGCGCCGTCCGGCGCGACGCGGCGCCGCGCCGGGCCAGGAAGTGGTGATACCGCGCACCTGGTCGGCCGGCGACGAATTCGGCCGCGGCGCCAATCGCGGCAGCGGCCGTCCGGCCGGCGGCCGCGGCGGACCGCGCAGTGGCGGCGGCAGTGGCAGCGGCGGTGGCGAAGGACGCGCCTGGGGCAACGACAACCGCGGCAACCAGGGCGGTCGCGGCGCACGCGACGACGACGCGCGCGGCAACCGCAGCTCTGCGCCATATGGCCATCCGGCCGGTGCGAACTACGGCAACCGCGCCGAACCCAACGGCAATCGCTCCGGCTACGGTGAACGCAGCGGCAATCGCAGCGGCGGCGGTGGTTACAACGAGCGCGGTTCCTCGCCGTACGGCGAGCGCGCGGCGCGCGGTCCCAGTGGCGCCCGTCCTGGCGGCAACCGTCCGGGCGGCGGCGGCAACCGGCCCGGTGGCGGCGGCAATCGCCCCGGCGGCAGCCGTCCGGGTGGCAGCCGCCCCGGCGGCGGCGGCGGCGGACGTCCGCCCGGCGGCGGCAACCGCGGCAATCGCGGCGGCGGCCCACGCGGCGGCAATCGCTGA
PROTEIN sequence
Length: 565
MTAAPRRTLTLKRPQTDEAAPAIEERLHKVLANAGLGSRRLLEQRIQNGEISVNGTPATIGVSVKSGDRVEVDGKLFVVIRDDAEQAQVLVYHKPEGVVTTREDPEGRPTVFEQLPRLKGQRWIAVGRLDINTTGLLLLTTDGNLANALMHPSSEIEREYICRVHGEVPDEVLERLKAGIELDDGPAHFDDIGVISRSGSHSWFRVVIREGRNREVRRLWDAAGFLVSRLKRVRYGTVELPRPLKRGHSQELDAEDTKALRELCGATQSEPTLTLQPVIHQRRASQSAITEYRPAPRGGAQQAWTGADRAEARELTRFDRIRDDGPARPGRPRGPKRFGPGAGGGAGRGNTQGRGQRVVDGNTDKPQRRPARRGAAPGQEVVIPRTWSAGDEFGRGANRGSGRPAGGRGGPRSGGGSGSGGGEGRAWGNDNRGNQGGRGARDDDARGNRSSAPYGHPAGANYGNRAEPNGNRSGYGERSGNRSGGGGYNERGSSPYGERAARGPSGARPGGNRPGGGGNRPGGGGNRPGGSRPGGSRPGGGGGGRPPGGGNRGNRGGGPRGGNR*