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scnpilot_p_inoc_scaffold_129_48

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 50490..51062

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB2_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 183.0
  • Bit_score: 141
  • Evalue 8.80e-31
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 182.0
  • Bit_score: 158
  • Evalue 9.70e-36
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 183.0
  • Bit_score: 141
  • Evalue 2.50e-31

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGACAGTCGAGGACGAACGGGTCGCCCGGGCCCGCCAAGGAGATCGCGACGCGTTCCGCCGTCTGGTCGAGGGCGAGACGCGCGCGCTGTATGCCGTGGCCGCGCGCATCACGCGCGACGCGGCGCTGGCCGAGGACGCGGTGCAGGAAGCCCTGTTCAGCGCCTGGCGCCGGCTCGCCGATTTCGACGGGCGCGCCGCGTTCACGACCTGGCTGCATCGCATCGTCGTCAACGCCGCGCTGGAGCAACTGCGCCGGCGCAGCGGCCGCGAGGCATTGGTGGCCGACGGTCCGGCCGGCGACGACGACGGCGCCGAGGATTTTCTCGCCGCGCATGCCGACGAGTTGCCGGGGCCGGAACAGCTGGCCGGCGGCAGCGAGATCGGCCGTCGCGTGCACCAGCAGCTCGCGCGCATGACGCATCTGGAGCGCAGTGCCTTCGTGCTGCGTCATCACGAAGGCCAGTCGCTGGAGGAAATCTGCGGCGTGCTGGCAATCAACGTTTCGGCCTGCAAGCAGGCCATTTTTCGTGCCGTGCGCAAGCTGCGCGGCGCGCTGGAACCGCTGAGGTAA
PROTEIN sequence
Length: 191
MTVEDERVARARQGDRDAFRRLVEGETRALYAVAARITRDAALAEDAVQEALFSAWRRLADFDGRAAFTTWLHRIVVNAALEQLRRRSGREALVADGPAGDDDGAEDFLAAHADELPGPEQLAGGSEIGRRVHQQLARMTHLERSAFVLRHHEGQSLEEICGVLAINVSACKQAIFRAVRKLRGALEPLR*