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scnpilot_p_inoc_scaffold_290_9

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 8192..8758

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QKX5_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 188.0
  • Bit_score: 144
  • Evalue 7.90e-32
Uncharacterized protein {ECO:0000313|EMBL:KFL37331.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 165
  • Evalue 1.00e-37
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 184.0
  • Bit_score: 158
  • Evalue 2.50e-36

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Taxonomy

Arenimonas donghaensis → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCAGGCGAGCACCGACGACATCACCGGCTGGCTCCACGACTGGCAGGACGGCGACGCCATCGCCCGCGACCGCGTGTTCACGCGTCTCTACGCCGAACTGAAGCGGCTCGCCACCGTCGTGCTGCGCGGCGAATCCGGCCACGACACGATGCAGCCGACGGCGCTGCTCAACGATGCGCTGATCAAGCTGACCACCGCCGCTCGCGCGCCGGCGGCGGATGATCGCGACCACTTCGTGCGCATTGTCGCCCGCGCGATGCGCCAGGTGCTCGTCGACCGCGCCCGCCGCAAGCTGGCCGACAAGCGCGGCGCGGGCGAGGCGCCGCTGTCGCTGGAAGGGCACGATGTCGCGCTCACCGCGAGCCCGGGCGAACTGCTCGCACTCGACGACGCGCTGTCCGCGCTGGCCCGGCTCGATGCGCGCGCCGCCGCCGTCGTCGAGCTGCGCGTGTTCGCCGGCCTCACGATCGAACAGACCGCGCAGGCGCTCGGCATCCATTCGTCCTCGGTCAACCGCGAATGGGCTCATGCGAGCGCGTGGCTGAAGCAGCACTGGGCGAGCTGA
PROTEIN sequence
Length: 189
MQASTDDITGWLHDWQDGDAIARDRVFTRLYAELKRLATVVLRGESGHDTMQPTALLNDALIKLTTAARAPAADDRDHFVRIVARAMRQVLVDRARRKLADKRGAGEAPLSLEGHDVALTASPGELLALDDALSALARLDARAAAVVELRVFAGLTIEQTAQALGIHSSSVNREWAHASAWLKQHWAS*