ggKbase home page

scnpilot_p_inoc_scaffold_1511_16

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(12033..14087)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 691.0
  • Bit_score: 1238
  • Evalue 0.0
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 693.0
  • Bit_score: 1205
  • Evalue 0.0
  • rbh
rho; transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 734.0
  • Bit_score: 839
  • Evalue 9.00e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
GTGGAGTCCCTCTCCGAGATCCAGACCGAGAACACCGAGAACGTCGAGAGCGCGCAAGCCACCGGCGTCGAGGAGAACACCGCCGAGGCGACCCCGGTCGCCGAGAGCACCGAGACCGCTGAGGTCGAGGCTCCCGCCGAGGAGTCCGCCGCCGCTGCCGCCGAGGCCGTTCAGACCGAGGCCCCCGACGTGGAGGTGCCGTCGGATGCCGAGGCTCCCGCCGCCGCCGAGGTCGAGCCCGCCCCCGTGGAGGCTGAGCCCGCCCCCGTGGAGGCTGAGCCCGCTGCGGCGGAGGCGGCGCCGGTCGTTCCCGAGGAGAAGCCAGCGAAGGCTCCCCGCAAGCGTGCGCCGCGCCGCGCGAAGAGCGCCGACGTCGCGCCCGCTGAGGATGCCGCCACGGACGCGGTGACCGAGACCGCTGCCGCCGCGCAGGACCCGGCAGAGTCCGCCGCTTCGACGCCGACGGCGGCCGACGAGACCCCCGCGGCCGAGGCTGCGGCCGAGACTCCTGCCGCCGACGCCGCCGAGACCGCCGCCGACGCCGCCGAGACCGCCGCCACCGGCGACGCGTCGGGTGCCGAAACGACGGACAGCGCCGCGGCAGACGCGGCAGGCGCCGCCGAGGGCGAGACCCCCAGCCGCAGCCGCTCGCGCAGCCGCAGCCGCAGCCGCAACCGCGGTCAGCGCGGCGAGAACGGCCAGAACGCTCAGGGTGCGCAGAACGCCCAGAACAACGCTCCGGCCGCTCCGGCCGCCGAAGAGAGCGCAGACGGCGACGACGAGCAGGCCCAGGGCCGCGGTCGCCAGCGCAACAAGCGTCGGGGCCCGGCGCAGAACGGCGACGAGTTCGAAACCGAGATCGGCGAGGACGACGTCCTCATCCCGATCGCCGGCATCCTCGACGTCCTCGACAACTACGCTTTCGTGCGCACCACCGGCTACCTGCCGGGGGCGAGCGACGTCTACGTGTCGCTCGGCCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCCGTCGTCGGCGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCCATCAACGGGCTGTCGGTCGACGACGCCGCCGAGCGTGTCGAGTTCGGTAAGCTCACCCCGCTCTACCCGCAGGAGCGCCTGCGCCTGGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTCGTCGCGCCCATCGGAAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCCAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGTCCCGAAGAGGTCACCGACATGCAGCGGACCGTCAAGGGTGAGGTCATCGCCTCCACCTTCGACCGTCCCGCCGAAGACCACACCACGGTCGCGGAGCTGGCCATCGAGCGCGCGAAGCGCCTCGTCGAGCTCGGCCGCGATGTCGTCGTGCTCCTCGACTCGATCACGCGCCTGGGCCGCGCGTACAACATCTCTGCACCCACGAGCGGCCGCGTGCTCAGCGGCGGCGTCGACGCGTCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGGGCAGCCCGCAACATCGAGAACGGCGGCTCGCTGACCATTCTCGCCACGGCGCTCGTGGAGACCGGCTCGAAGATGGACGAGGTCATCTTTGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGCCTGTCGCGCCAGCTGGCCGACAAGCGGATCTTCCCGGCCGTCGACGTCAACGCGTCCTCGACCCGCCGCGAGGAGATGCTGCTGAACCCCGATGAGGTGAAGATCACCTGGAAGCTGCGTCGCGCCCTCGCCGGCCTCGACCCGCAGCAGGCCCTCGAGGTGGTGCTCGGCAAGCTCAAGGAGACGAGCTCCAACGTCGAGTTCCTCTACCAGATGCAGAACGTGCAGATGAAGTCGGTGTCCACGGCCGGCGGCGGCCACAGCCACGGGCACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 685
VESLSEIQTENTENVESAQATGVEENTAEATPVAESTETAEVEAPAEESAAAAAEAVQTEAPDVEVPSDAEAPAAAEVEPAPVEAEPAPVEAEPAAAEAAPVVPEEKPAKAPRKRAPRRAKSADVAPAEDAATDAVTETAAAAQDPAESAASTPTAADETPAAEAAAETPAADAAETAADAAETAATGDASGAETTDSAAADAAGAAEGETPSRSRSRSRSRSRNRGQRGENGQNAQGAQNAQNNAPAAPAAEESADGDDEQAQGRGRQRNKRRGPAQNGDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLNPDEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLYQMQNVQMKSVSTAGGGHSHGHENSIR*