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scnpilot_p_inoc_scaffold_1615_25

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 24125..25087

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4A2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 315.0
  • Bit_score: 550
  • Evalue 8.10e-154
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIC57645.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 310.0
  • Bit_score: 558
  • Evalue 7.10e-156
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 300.0
  • Bit_score: 376
  • Evalue 7.70e-102

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAGAAACATGCCATGCGATGATGTTTACGTGAAGGAGATCGCCCCGGAACTGGACGTCCAGAGCCTGCGTACCGTGCGCGCGATCGCCGACACCGGCTCGATCACAGCGGCCGCCGCCTCTCTGGGATACAGTCAGCCCGCCATCAGCCAGCAGCTGCGGCGTTTGGAGAACCGGCTGGGGGTTGCGCTGATCGAGCGCGTCGGTCGCGGCGTGCGGCTGACGGAGGCCGGCCGCGTGCTCGCCCGTCATGCGCCGGCCGTGACGCACGCCTTCGACGCCGCCGCCGAAGAACTGGCACAGCTGAGGGGGCTGCGCACCGGTGTCGTCCGCCTTGTCGCCTTCCCCTCGGCTTCGCCCGTGCTCGTTCCGCGGTCGCTTGCGACGCTGTCCGCTTCTCACCCCGGACTCACGCTCACCTATGTGGAGGCGGAGCCACCGGAGGCGGTGGAAGCGATTCGCGAAGACCGCGCCGACATCGCGCTGACGTTCAGCTACCCGGGGGACCGCGACGACCCGCACGGATCGAGCGCCCGGGGGCTCACCGTACGCAGCGCGGGTCGCGACGACCTGCTGCTCGTGCTGCCCGGAGGCCATGCGGATGTGGCGGACGTCGCGGCACTCGCCGACGCGACGTGGATCGCCGGTTGCCCTCGCTGTCGCGGCCATCTGCTGGAGCTCTGCGGTCGCGCGGGATTCGAACCGCGCATCGGGTTCGAGACCGACAATGCCGTCGCGGTCGAAGGACTCGTGGCGCAGGGGTTGGGCGTGGCGACGTTGCCGCGGATGGCGGTCGAGTCCTTCCCGTTGCTGCCCGGCGTGCAGACCTCGCCGCTGCCGCCGGCCGAGGCGCGAGGACTCCACGTCGTCACGGCACGCGACGCCGAACGGGTGCCGTCGGTGAGCACCGTGCTCGAGGTGCTCGGGCGGGAACTCGCTGCGGTGCAATCCGTATCAGCCTGA
PROTEIN sequence
Length: 321
MRNMPCDDVYVKEIAPELDVQSLRTVRAIADTGSITAAAASLGYSQPAISQQLRRLENRLGVALIERVGRGVRLTEAGRVLARHAPAVTHAFDAAAEELAQLRGLRTGVVRLVAFPSASPVLVPRSLATLSASHPGLTLTYVEAEPPEAVEAIREDRADIALTFSYPGDRDDPHGSSARGLTVRSAGRDDLLLVLPGGHADVADVAALADATWIAGCPRCRGHLLELCGRAGFEPRIGFETDNAVAVEGLVAQGLGVATLPRMAVESFPLLPGVQTSPLPPAEARGLHVVTARDAERVPSVSTVLEVLGRELAAVQSVSA*