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scnpilot_p_inoc_scaffold_4164_9

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7873..8562)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=162426 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 8.50e-119
DNA ligase n=2 Tax=Microbacterium RepID=H8E4I4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 222.0
  • Bit_score: 413
  • Evalue 1.40e-112
ligA; NAD-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 238.0
  • Bit_score: 317
  • Evalue 4.00e-84

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
CCCTCGTTGCGGGCATTCGCGATCACCCGCGCGCCCTTCCGTCGCCAGCCCTCGTCGGCGGAGAAGAAGGAGGGACTCACAGGTCCCCAGCCGTCGGCCCAGGCGCTCACCCTTCTCGAGGAACTCGAGAAGGCCAAGACGAAGGACCTGTGGCGGTTTCTGGTCGCGTTGAACATCCGCCACGTCGGCCCGGTCGCCGCGCGGGCACTCGCGCAGTGGTTCGGTTCGCTGGACGCGATCCGCGCGGCCGAGCGCGACGCTCTCGCCGACGTCGACGGCGTCGGCGGCATCATCGCGGACTCGCTCCTGGAATGGTTCGCCGTCGACTGGCATCAGGAGATCGTGGAACGCTGGGCGGCGGCGGGCGCGGTCTTGGAGATTCCAGGTCACCCCGGCCCGGGAGCTGCCGTCGCCGCCGGCGGCGTGCTCGAGGGTGTCACGGTCGTTGCGACCGGCACGCTGGAGGGCTACACCCGAGAGGGCGCGCAGGAGGCGATCATTGCCGCTGGCGGGAAAGCAGCCTCTTCCGTGTCGAAGAAGACCGACTTCGTCGCCGCAGGCCCGGGCGCGGGCTCGAAACTCGCCAAGGCGGAGGAACTCGGCATCCGCATCATCGATGCCGCGCAGTTTCGCATCCTCGTCGAGCAGGGGCCCGCCGCGCTCGGGGCACTCGATCCCGACGCGGGCTGA
PROTEIN sequence
Length: 230
PSLRAFAITRAPFRRQPSSAEKKEGLTGPQPSAQALTLLEELEKAKTKDLWRFLVALNIRHVGPVAARALAQWFGSLDAIRAAERDALADVDGVGGIIADSLLEWFAVDWHQEIVERWAAAGAVLEIPGHPGPGAAVAAGGVLEGVTVVATGTLEGYTREGAQEAIIAAGGKAASSVSKKTDFVAAGPGAGSKLAKAEELGIRIIDAAQFRILVEQGPAALGALDPDAG*