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DolZOral124_scaffold_2743

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2743_1
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2..484
-----------------
DNA (483bp)
protein (161aa)
DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=CG_Ignavi_01
modification methylase BamHI (EC:2.1.1.113)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PFC3_9FLAO
DolZOral124_scaffold_2743_2
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(547..1506)
-----------------
DNA (960bp)
protein (320aa)
putative Na+-dependent transporter Tax=GWA2_Bacteroidetes_31_9b_curated
Putative Na+-dependent transporter id=2260728 bin=GWB2_Bacteroidetes_32_14 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
symporter
DolZOral124_scaffold_2743_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1499..1963)
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X6L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63334.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihomini
regulatory protein
DolZOral124_scaffold_2743_4
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2113..2874
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXE6_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM81534.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
DolZOral124_scaffold_2743_5
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

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comp(2991..4085)
-----------------
DNA (1095bp)
protein (365aa)
Putative uncharacterized protein id=3964312 bin=GWF2_WWE1_40_14 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWF2_WWE1_40_14 organism_group=WWE1
permease Tax=GWF2_WWE1X_40_14_curated
putative sodium:dicarboxylate symporter permease
DolZOral124_scaffold_2743_6
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4463..5560
-----------------
DNA (1098bp)
protein (366aa)
Internalin-like protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VVC6_9FLAO
Internalin-like protein {ECO:0000313|EMBL:EPR74190.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
leucine-rich repeat-containing protein
DolZOral124_scaffold_2743_7
unknown

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comp(5706..6281)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

DolZOral124_scaffold_2743_trna_2
unknown

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comp(6562..6635)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_2743_trna_1
unknown

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comp(6646..6729)
-----------------
DNA (84bp)
transferRNA
DolZOral124_scaffold_2743_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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6832..8772
-----------------
DNA (1941bp)
protein (647aa)
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Serine/threonine protein kinases, putative id=3814369 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
serine phosphatase RsbU, regulator of sigma subunit
DolZOral124_scaffold_2743_9
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8786..9760)
-----------------
DNA (975bp)
protein (325aa)
isoprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWD2_Bacteroidetes_33_33_curated
Uncharacterized protein id=2358575 bin=GWA2_Bacteroidetes_33_15 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
polyprenyl synthetase
DolZOral124_scaffold_2743_10
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10155..10523
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003766AC4
Transcriptional regulator, MecI family {ECO:0000313|EMBL:EMQ94953.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp
transcriptional regulator
DolZOral124_scaffold_2743_11
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10721..12031
-----------------
DNA (1311bp)
protein (437aa)
Outer membrane protein assembly factor YaeT n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VET2_9BACT
Outer membrane protein assembly factor YaeT {ECO:0000313|EMBL:EPR68541.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cycloba
blaR1 peptidase M56
DolZOral124_scaffold_2743_12
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12073..12741
-----------------
DNA (669bp)
protein (223aa)
TonB-dependent receptor n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GPR9_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EJU15925.1}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral t
energy transducer TonB
DolZOral124_scaffold_2743_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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12955..13593
-----------------
DNA (639bp)
protein (213aa)
TonB id=4124875 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
outer membrane protein TonB; K03832 periplasmic protein TonB Tax=GWE2_Bacteroidetes_40_63_curated
energy transducer TonB
DolZOral124_scaffold_2743_14
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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13687..14367
-----------------
DNA (681bp)
protein (227aa)
TonB id=1851652 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
energy transducer TonB
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_2743_15
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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14584..15765
-----------------
DNA (1182bp)
protein (394aa)
GTPase HflX id=2218121 bin=GWB2_Bacteroidetes_32_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
GTP-binding protein HflX; K03665 GTP-binding protein HflX Tax=GWD2_Bacteroidetes_33_33_curated
GTPase HflX
DolZOral124_scaffold_2743_16
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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15770..17695
-----------------
DNA (1926bp)
protein (642aa)
Menaquinone biosynthesis decarboxylase, SCO4490 family id=3681002 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
menaquinone biosynthesis decarboxylase Tax=GWF2_Bacteroidetes_35_48_curated
menaquinone biosynthesis decarboxylase
DolZOral124_scaffold_2743_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(17728..18189)
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein Tax=CG_Bacteroid_01
DolZOral124_scaffold_2743_18
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18446..19171)
-----------------
DNA (726bp)
protein (242aa)
DNA repair protein recO; K03584 DNA repair protein RecO (recombination protein O) Tax=GWA2_Bacteroidetes_31_9b_curated
DNA repair protein RecO id=1953350 bin=GWE2_Bacteroidetes_32_14 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
DNA repair protein
DolZOral124_scaffold_2743_19
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(19340..21658)
-----------------
DNA (2319bp)
protein (773aa)
Two component regulator propeller Tax=GWA2_Bacteroidetes_31_9b_curated
Two component regulator propeller id=3028389 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
DolZOral124_scaffold_2743_20
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21668..22264)
-----------------
DNA (597bp)
protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
deoxyribonucleoside-triphosphatase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002E0BF5A
deoxyribonucleotide triphosphate pyrophosphatase
DolZOral124_scaffold_2743_21
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

22435..23118
-----------------
DNA (684bp)
protein (228aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" sour
DNA methylase N-4/N-6 domain protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QS89_CHLT3
DNA methylase N-4/N-6 domain-containing protein
DolZOral124_scaffold_2743_22
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

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23137..23340
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
hypothetical protein id=137888 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
DolZOral124_scaffold_2743_23
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

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23343..24377
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
hypothetical protein id=2230661 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
DolZOral124_scaffold_2743_24
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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24398..24538
-----------------
DNA (141bp)
protein (47aa)
Uncharacterized protein n=2 Tax=Prevotella oralis RepID=E7RPV9_9BACT
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
hypothetical protein
DolZOral124_scaffold_2743_25
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

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24513..24812
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU04353.1}; TaxID=1618649 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_45_21.;"
Putative uncharacterized protein id=2803730 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
hypothetical protein
DolZOral124_scaffold_2743_26
unknown

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24964..25419
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

DolZOral124_scaffold_2743_27
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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25552..26694
-----------------
DNA (1143bp)
protein (381aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4J7T0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESP91297.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
DolZOral124_scaffold_2743_28
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(27006..27209)
-----------------
DNA (204bp)
protein (68aa)
Putative transcriptional regulator n=1 Tax=Algoriphagus machipongonensis RepID=A3HTL6_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:EAZ83184.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machi
DNA-binding protein
Displaying items 1-30 of 50 in total

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