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DolZOral124_scaffold_1921

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1921_1
Mycoplasma ovipneumoniae, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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2..397
-----------------
DNA (396bp)
protein (132aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
type II site specific deoxyribonuclease n=1 Tax=Mycoplasma ovipneumoniae RepID=UPI000248D45D
Type II restriction modification system endonuclease {ECO:0000313|EMBL:EXU60806.1}; TaxID=1188239 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma ovipneu
DolZOral124_scaffold_1921_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


658..849
-----------------
DNA (192bp)
protein (64aa)
50S ribosomal protein L28 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RL28_ALKMQ
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azor
DolZOral124_scaffold_1921_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1335..2018)
-----------------
DNA (684bp)
protein (228aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWF9_9CLOT
tRNA (guanine-N1)-methyltransferase
DolZOral124_scaffold_1921_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2128..2697)
-----------------
DNA (570bp)
protein (190aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PS43_CLOSD
rimM; putative 16S rRNA-processing protein rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclo
DolZOral124_scaffold_1921_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2774..3004)
-----------------
DNA (231bp)
protein (77aa)
UPF0109 protein Curi_c16220 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B117_CLOA9
KH domain-containing RNA-binding protein
UPF0109 protein Curi_c16220 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 /
DolZOral124_scaffold_1921_6
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3020..3280)
-----------------
DNA (261bp)
protein (87aa)
30S ribosomal protein S16 n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TN76_THETC
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoan
DolZOral124_scaffold_1921_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3307..4650)
-----------------
DNA (1344bp)
protein (448aa)
Signal recognition particle protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHC0_ALKOO
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
DolZOral124_scaffold_1921_8
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4864..5253)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036D62F9
UPF0122 protein TZ02_15865 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
DolZOral124_scaffold_1921_9
unknown

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comp(5298..5513)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

DolZOral124_scaffold_1921_10
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5691..7964
-----------------
DNA (2274bp)
protein (758aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z8R8_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:ESL03325.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source=
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1921_11
unknown

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comp(8004..8192)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

DolZOral124_scaffold_1921_12
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8210..8569)
-----------------
DNA (360bp)
protein (120aa)
UPF0102 protein VP0448 n=16 Tax=Vibrio parahaemolyticus RepID=Y448_VIBPA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
hypothetical protein
DolZOral124_scaffold_1921_13
unknown

Not on your lists

comp(8573..8677)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

DolZOral124_scaffold_1921_14
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8709..9926)
-----------------
DNA (1218bp)
protein (406aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UF56_SPIAZ
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AFG36149.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATC
DolZOral124_scaffold_1921_15
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10199..10459)
-----------------
DNA (261bp)
protein (87aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XDW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL18845.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
type III secretion exporter
DolZOral124_scaffold_1921_16
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10475..12295)
-----------------
DNA (1821bp)
protein (607aa)
Flagellar hook-length control protein FliK n=1 Tax=Clostridium termitidis CT1112 RepID=S0FRJ3_9CLOT
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:EMS71118.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostri
DolZOral124_scaffold_1921_17
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12550..13449)
-----------------
DNA (900bp)
protein (300aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B782B0
DolZOral124_scaffold_1921_18
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13503..14402)
-----------------
DNA (900bp)
protein (300aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CF90_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azo
rbgA; ribosome biogenesis GTPase A
DolZOral124_scaffold_1921_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14728..15639)
-----------------
DNA (912bp)
protein (304aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalin
Pseudouridine synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CT32_9CLOT
pseudouridylate synthase
DolZOral124_scaffold_1921_20
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15656..16348)
-----------------
DNA (693bp)
protein (231aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSZ9_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49317.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
DolZOral124_scaffold_1921_21
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16393..17658)
-----------------
DNA (1266bp)
protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z4H1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGG80055.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
Major Facilitator Superfamily protein
DolZOral124_scaffold_1921_22
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17983..19908
-----------------
DNA (1926bp)
protein (642aa)
Glutamine synthetase, catalytic region n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMQ7_ALKMQ rbh
Glutamine synthetase {ECO:0000313|EMBL:KJF28490.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
glutamine synthetase
DolZOral124_scaffold_1921_23
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20568..22733
-----------------
DNA (2166bp)
protein (722aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WZM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15909.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1921_24
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23084..24778
-----------------
DNA (1695bp)
protein (565aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ACF3_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EMZ22099.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Euba
GGDEF domain-containing protein
DolZOral124_scaffold_1921_25
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24848..25987
-----------------
DNA (1140bp)
protein (380aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Ente
metN1; methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN 1 n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2R2F6_9ENTE rbh
DolZOral124_scaffold_1921_26
Carnobacterium sp. AT7, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26023..26688
-----------------
DNA (666bp)
protein (222aa)
ABC transporter, permease protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6W5_9LACT
ABC transporter, permease protein {ECO:0000313|EMBL:EDP68930.1}; TaxID=333990 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. A
ABC transporter permease
DolZOral124_scaffold_1921_27
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26747..27598
-----------------
DNA (852bp)
protein (284aa)
Lipoprotein n=1 Tax=Enterococcus faecalis TX0012 RepID=E6I6C9_ENTFL
metQ; Lipoprotein, YaeC family
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1244152 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium SB2C-2.;"
DolZOral124_scaffold_1921_28
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

28118..29767
-----------------
DNA (1650bp)
protein (550aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HQH1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25485.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
family 5 extracellular solute-binding protein
DolZOral124_scaffold_1921_29
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29866..30804
-----------------
DNA (939bp)
protein (313aa)
Putative glutathione ABC transporter, permease protein GsiC n=2 Tax=Turicibacter RepID=D4W991_9FIRM
Peptide ABC transporter permease {ECO:0000313|EMBL:KIL35364.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
DolZOral124_scaffold_1921_30
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30801..31805
-----------------
DNA (1005bp)
protein (335aa)
Oligopeptide ABC transporter, permease protein OppC n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIW8_9FIRM
Putative oligopeptide ABC transporter, permease protein OppC {ECO:0000313|EMBL:EFF62504.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turic
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 49 in total

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