ggKbase home page

DolZOral124_scaffold_1938

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1938_1
unknown

Not on your lists

1..90
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

DolZOral124_scaffold_1938_2
unknown

Not on your lists

139..492
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

DolZOral124_scaffold_1938_3
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(813..1856)
-----------------
DNA (1044bp)
protein (348aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AD53E
S-adenosylmethionine tRNA ribosyltransferase
DolZOral124_scaffold_1938_4
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1878..2567)
-----------------
DNA (690bp)
protein (230aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IIU6_PSYTT
tRNA pseudouridine synthase TruB
DolZOral124_scaffold_1938_5
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2572..3378)
-----------------
DNA (807bp)
protein (269aa)
bacitracin resistance protein Tax=GWA2_Bacteroidetes_31_9b_curated
undecaprenol kinase id=2095661 bin=GWB2_Bacteroidetes_32_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
bacitracin resistance protein BacA
DolZOral124_scaffold_1938_6
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3521..4771)
-----------------
DNA (1251bp)
protein (417aa)
Transporter associated domain protein id=3845917 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hemolysin Tax=GWF2_Bacteroidetes_38_335_curated
hemolysin
DolZOral124_scaffold_1938_7
unknown

Not on your lists

4870..5442
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

DolZOral124_scaffold_1938_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5722..6987)
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00030662E1
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
DolZOral124_scaffold_1938_9
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6996..7517)
-----------------
DNA (522bp)
protein (174aa)
RNA polymerase subunit sigma-24 n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DAA3
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWB2_Bacteroidetes_41_8_curated
RNA polymerase subunit sigma-24
DolZOral124_scaffold_1938_10
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(7591..8604)
-----------------
DNA (1014bp)
protein (338aa)
Putative uncharacterized protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FXG1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EHC10621.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
DolZOral124_scaffold_1938_11
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9106..10134
-----------------
DNA (1029bp)
protein (343aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWF2_Bacteroidetes_38_335_curated
Branched-chain-amino-acid transaminase id=3899679 bin=GWF2_Bacteroidetes_38_335 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
branched-chain amino acid aminotransferase
DolZOral124_scaffold_1938_12
unknown

Not on your lists

comp(10209..10724)
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

DolZOral124_scaffold_1938_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10739..11644)
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein AtheD1_08108 id=2859572 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
DolZOral124_scaffold_1938_14
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11736..12527)
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B58A51
Uncharacterized protein {ECO:0000313|EMBL:KGE85058.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
hypothetical protein
DolZOral124_scaffold_1938_15
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12641..13369
-----------------
DNA (729bp)
protein (243aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7N3Y2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ96449.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
DolZOral124_scaffold_1938_16
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13486..13911)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000362F99F
sugar isomerase Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
sugar isomerase
DolZOral124_scaffold_1938_17
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13923..16088)
-----------------
DNA (2166bp)
protein (722aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Divergent AAA domain protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1PB71_9FLAO rbh
Divergent AAA domain protein {ECO:0000313|EMBL:EKY12886.1}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophag
DolZOral124_scaffold_1938_18
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16157..16891)
-----------------
DNA (735bp)
protein (245aa)
type 11 methyltransferase Tax=CG_Magasa_02
Methyltransferase type 11 id=3646583 bin=GWF2_Ignavibacteria_35_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
type 11 methyltransferase
DolZOral124_scaffold_1938_19
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17014..18276)
-----------------
DNA (1263bp)
protein (421aa)
O-antigen translocase n=1 Tax=Polaribacter sp. MED152 RepID=A2U3E1_9FLAO rbh
O-antigen translocase
O-antigen translocase {ECO:0000313|EMBL:EAQ40836.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152
DolZOral124_scaffold_1938_20
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18284..19177)
-----------------
DNA (894bp)
protein (298aa)
Putative uncharacterized protein id=4011069 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
DolZOral124_scaffold_1938_21
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19182..19877)
-----------------
DNA (696bp)
protein (232aa)
DNA repair protein id=4204418 bin=GWF2_Bacteroidetes_38_335 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=GWF2_Bacteroidetes_38_335_curated
radC; DNA repair protein RadC
DolZOral124_scaffold_1938_22
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20087..20719)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00037C0314
Haloacid dehalogenase-like hydrolase, putative {ECO:0000313|EMBL:EDX71491.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofas
HAD-superfamily hydrolase
DolZOral124_scaffold_1938_23
unknown

Not on your lists

20908..22137
-----------------
DNA (1230bp)
protein (410aa)

This feature has no annotations

DolZOral124_scaffold_1938_24
unknown

Not on your lists

22377..22505
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

DolZOral124_scaffold_1938_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22634..22996
-----------------
DNA (363bp)
protein (121aa)
Ribosomal silencing factor RsfS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML0_NIAKG
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
DolZOral124_scaffold_1938_26
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23008..25059
-----------------
DNA (2052bp)
protein (684aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=GWE2_Bacteroidetes_32_14_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH id=1943675 bin=GWE2_Bacteroidetes_32_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
DolZOral124_scaffold_1938_27
unknown

Not on your lists

25084..26046
-----------------
DNA (963bp)
protein (321aa)

This feature has no annotations

DolZOral124_scaffold_1938_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

26027..26848
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000360389C
CDP-diglyceride synthetase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
phosphatidate cytidylyltransferase
DolZOral124_scaffold_1938_29
unknown

Not on your lists

27367..28080
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

DolZOral124_scaffold_1938_30
unknown

Not on your lists

28093..28341
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

View Taxonomy